Sediminicola sp. YIK13: SB49_04485
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Entry
SB49_04485 CDS
T04145
Name
(GenBank) succinate--CoA ligase
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
syi
Sediminicola sp. YIK13
Pathway
syi00020
Citrate cycle (TCA cycle)
syi00640
Propanoate metabolism
syi00660
C5-Branched dibasic acid metabolism
syi00720
Other carbon fixation pathways
syi01100
Metabolic pathways
syi01110
Biosynthesis of secondary metabolites
syi01120
Microbial metabolism in diverse environments
syi01200
Carbon metabolism
Module
syi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
syi_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
syi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SB49_04485
00640 Propanoate metabolism
SB49_04485
00660 C5-Branched dibasic acid metabolism
SB49_04485
09102 Energy metabolism
00720 Other carbon fixation pathways
SB49_04485
Enzymes [BR:
syi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
SB49_04485
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Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
GFO_IDH_MocA
KARI_N
DUF7736
Motif
Other DBs
NCBI-ProteinID:
ALM07138
UniProt:
A0A0S1S323
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All DBs
Position
complement(1012621..1013493)
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AA seq
290 aa
AA seq
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MSVLVNKDSKIIVQGFTGSEGTFHAEQMIEYGTNVVGGVTPGKGGQEHLGRPVFNTVEEA
VEKVGADTTIIFVPPAFAADAIMEAAEAGIKVIITITEGIPVADMVKVYDYIKGKDCRLI
GPNCPGVITPGEAKVGIMPGFVFKKGNIGIVSKSGTLTYEAADQVVRQGLGITTAIGIGG
DPIIGTTTKEAVELLINDPETQCVVMIGEIGGQLEADAAHWYKASGSKKPIVGFIAGETA
PAGRTMGHAGAIVGGSDDTAQAKKRIMRECGIHVVDSPAEIGLKVKEVVG
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttttagttaataaggactcgaaaattattgtacaaggttttacaggtagtgaa
ggtacttttcacgccgaacaaatgatcgaatacggaaccaacgtagttggaggtgttact
ccaggtaaaggaggtcaggagcatttgggaagacctgttttcaacactgtagaggaagct
gtagagaaagtaggagcggatacaactattatctttgtgccacccgcatttgcagcagat
gccattatggaagcagccgaagcaggaataaaagttattattactattaccgaaggtatt
cctgtagctgatatggtgaaggtttacgactatataaaaggtaaagattgcagactgata
ggtcctaactgtccaggagtaattaccccaggggaggcaaaagtaggtattatgccaggt
tttgtctttaagaaaggaaatattggaatcgtttcaaaatcaggaacattaacatacgaa
gctgctgaccaggtagtgcgtcaaggattggggataactaccgccattggaattggtgga
gatccaattattggtactacaacaaaagaagctgttgaattgttgatcaacgatccagaa
acacagtgtgtggttatgattggagagattggtggtcaattggaagctgatgctgcccat
tggtacaaagccagtggtagtaaaaagccaatcgtaggttttatcgcaggtgaaactgct
ccggcaggaagaacgatgggccatgcaggtgctattgttggtggtagcgatgatacagct
caggccaaaaaacgtattatgagggaatgtggaatccacgtagtagattctccagcagaa
attggtttaaaagtaaaagaagtagtaggctaa
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