Sediminicola sp. YIK13: SB49_04505
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Entry
SB49_04505 CDS
T04145
Name
(GenBank) hydroxymyristoyl-ACP dehydratase
KO
K16363
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:
3.5.1.108
4.2.1.59
]
Organism
syi
Sediminicola sp. YIK13
Pathway
syi00061
Fatty acid biosynthesis
syi00540
Lipopolysaccharide biosynthesis
syi01100
Metabolic pathways
syi01212
Fatty acid metabolism
Module
syi_M00083
Fatty acid biosynthesis, elongation
Brite
KEGG Orthology (KO) [BR:
syi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SB49_04505
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
SB49_04505
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
syi01005
]
SB49_04505
01004 Lipid biosynthesis proteins [BR:
syi01004
]
SB49_04505
Enzymes [BR:
syi01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
SB49_04505
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.59 3-hydroxyacyl-[acyl-carrier-protein] dehydratase
SB49_04505
Lipopolysaccharide biosynthesis proteins [BR:
syi01005
]
Lipid A
SB49_04505
Lipid biosynthesis proteins [BR:
syi01004
]
Fatty acid synthase
Component type
SB49_04505
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
FabA
ApeI-like
HP0268
4HBT_2
Motif
Other DBs
NCBI-ProteinID:
ALM07142
UniProt:
A0A0S1S9R0
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All DBs
Position
complement(1015936..1017336)
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AA seq
466 aa
AA seq
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MSKTTAKQRTIEKEITLSGVGLHTGENVTMKFVPAPENHGYAFKRVDIEGEPIIEADANY
VVNTQRGTNLEKNGVKIQTSEHVLAALVGLEIDNVLIELNSSEPPIMDGSSKFFIEALEK
AGIVEQDAVRNEYVVKEVITYKDEATGSEITIIPSDEYQVTTMVDFGTKVLGTQNATLER
LSDFKTEIALARTFSFLHELEMLLEHGLIKGGDLNNAIVYVDKEISESTMLKLQKAFKKE
KLSVKPNGILDNLTLHHPNEAARHKLLDVIGDLALVGTRIRGKVIANKPGHFVNTQFAQK
LSKIIKMEKRNSVPTYDLNLPPLMDIHQIMAMLPHRPPFLLIDRILELSDSHVVGMKNVT
MNEPFFVGHFPDAPVMPGVLQVEAMAQTGGILVLSTVPDPENYLTFFMKIDNVKFKQKVL
PGDTLTFHCSLITPIRRGICHMQAYAYANGKLVCEAEMMAQIAKKK
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaaaacaactgctaaacaaaggactatagagaaggagattacactgtccggtgtt
ggattacataccggagagaatgtcacaatgaaatttgtgccagctcctgaaaaccatggc
tacgccttcaaaagagttgatatagaaggggaacccatcattgaggccgatgccaattat
gtggtgaatacccagcgcggtaccaatttagaaaaaaatggggtcaagattcaaacttct
gagcacgtgctagctgctctggtaggtttggaaattgataatgtcctcatagagctcaac
tcgtctgaaccgcccataatggatggttcctccaagttttttatagaagctttggaaaaa
gctggcattgtggaacaagatgctgttaggaatgaatatgtagtaaaagaggttattacc
tataaagacgaggccactggaagtgaaattaccatcattccttcagatgaataccaagtg
accaccatggtcgattttgggaccaaagtattagggacccaaaatgcaaccttggagcgt
ttatcagattttaaaacagaaatagccctagcgcgtacttttagttttttacatgaactg
gaaatgttgttggagcatgggttgattaaaggaggtgatctaaataacgccattgtatat
gtagataaggagatttccgaatctaccatgttgaaactacaaaaagcctttaaaaaagaa
aagctttcggtaaaaccaaatggcattctggacaaccttaccctacaccatccaaacgag
gctgcaaggcataagctattggatgttataggtgaccttgccttggtaggtacaaggata
cgaggtaaagtcattgcaaataaaccggggcattttgtgaatacccaatttgcacaaaaa
ttgtccaaaataataaaaatggagaaaaggaacagcgttcctacctatgatctcaacctg
ccacccttgatggatatccatcaaattatggccatgttgccacatagaccaccattctta
ttgatcgacagaattttggaactgtccgatagtcatgtggtaggaatgaagaacgtgacc
atgaacgaacctttttttgtaggacattttcccgatgctcctgtgatgcctggagtttta
caggtggaggccatggcacagaccggaggaatcttggttttgagtactgttcccgatccc
gagaattatctgaccttctttatgaagatcgataatgtaaaatttaaacaaaaagtattg
ccaggtgacaccctaacctttcactgtagcctaattacccctataaggagaggaatatgc
catatgcaagcttatgcttatgcaaacggtaaattggtttgcgaggcagaaatgatggca
caaatagcaaaaaagaaataa
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