Sediminicola sp. YIK13: SB49_04730
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Entry
SB49_04730 CDS
T04145
Name
(GenBank) transcriptional regulator
KO
K02081
DeoR family transcriptional regulator, aga operon transcriptional repressor
Organism
syi
Sediminicola sp. YIK13
Brite
KEGG Orthology (KO) [BR:
syi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
syi03000
]
SB49_04730
Transcription factors [BR:
syi03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
SB49_04730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
GntR
HTH_Mga
HTH_27
Fe_dep_repress
Put_DNA-bind_N
HTH_5
HTH_PafC
EAP30
MarR
HTH_24
HTH_36
HTH_20
eWH_GTF3C1
HTH_12
FeoC
DDRGK
MarR_2
Motif
Other DBs
NCBI-ProteinID:
ALM07182
UniProt:
A0A0S1SA36
LinkDB
All DBs
Position
complement(1062921..1063682)
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AA seq
253 aa
AA seq
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MKRHQDILERLQEKKYVEVSDLCKSLNVSAVTIRKDLRILEEKGLLFRTHGGASFDNPYI
NDRPVNEKEKISVSEKNKIAEAAAQLILENDSIMIASGTTVQALARCIRPKGKLTVITSS
LNVTLELIKFREVEVLQLGGYVRHSSSSVVGNYAAYILDNISCSKLFLSVDGIDLEYGLS
TTHLEEAQLNKRMLTAAQKIILLVDSSKFGKKSFAKICDLEQIDEIITDRGISLSLIEKL
EEKGITVTVSNKE
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagacatcaagatattttggaaagattacaggagaaaaaatatgtggaagtatcg
gatctctgcaaaagcttgaatgtttctgcggtaaccattagaaaggatttaagaattttg
gaagaaaaagggctcttatttagaacccatgggggagcctcatttgataatccttatata
aatgataggcctgttaatgagaaggaaaagatttcggtatctgaaaaaaataaaatagca
gaagctgcagcccaactcattctggaaaatgattccataatgatcgcttcgggaactacc
gtccaagcattggcaaggtgtattaggcccaaaggaaaattaacggtgatcacctcctct
ttaaatgtgaccttagagcttattaagtttagggaagtggaagtattacaattaggaggt
tacgtgcgtcatagttcatcttctgtagtgggtaattatgcggcttatatccttgataat
atctcttgcagtaaattgtttttaagtgttgatgggatcgacttggagtatggtttaagt
actactcatttggaggaggcgcagttgaacaaaaggatgttgaccgcagcacaaaaaata
atactattggttgattcttctaaattcggtaaaaaaagttttgccaaaatttgtgatttg
gaacaaatagatgagattataacagataggggcatctcactatcattaattgagaaattg
gaagaaaaaggaataacggttacagttagtaataaggagtag
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