Sediminicola sp. YIK13: SB49_05100
Help
Entry
SB49_05100 CDS
T04145
Name
(GenBank) molecular chaperone DnaK
KO
K04043
molecular chaperone DnaK
Organism
syi
Sediminicola sp. YIK13
Pathway
syi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
syi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SB49_05100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
syi03019
]
SB49_05100
03110 Chaperones and folding catalysts [BR:
syi03110
]
SB49_05100
03029 Mitochondrial biogenesis [BR:
syi03029
]
SB49_05100
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
syi04147
]
SB49_05100
Messenger RNA biogenesis [BR:
syi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SB49_05100
Chaperones and folding catalysts [BR:
syi03110
]
Heat shock proteins
HSP70 / DNAK
SB49_05100
Mitochondrial biogenesis [BR:
syi03029
]
Mitochondrial protein import machinery
Matrix
MMC/PAM proteins
SB49_05100
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
SB49_05100
Exosome [BR:
syi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SB49_05100
Exosomal proteins of breast cancer cells
SB49_05100
Exosomal proteins of colorectal cancer cells
SB49_05100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FtsA
DUF7713
FGGY_C
DUF7365
CDC45
TMP_2
Motif
Other DBs
NCBI-ProteinID:
ALM07245
UniProt:
A0A0S1SDA2
LinkDB
All DBs
Position
complement(1148189..1150096)
Genome browser
AA seq
635 aa
AA seq
DB search
MSKIIGIDLGTTNSCVSVMEGNEPVVIPNAEGKRTTPSVIAFVEGGEIKVGDPAKRQAVT
NPTKTIYSIKRFMGNKFSESSKEAGRVPYKVVKGDNDTPRVDIDGRLYSPQELSAMILQK
MKKTAEDYLGQTVTRAVITVPAYFNDAQRQATKEAGEIAGLTVERIINEPTAASLAYGLD
KKDKEQKIVVFDFGGGTHDVSILELGDGVFEVLSTDGDTHLGGDDVDQKIIDWLADEFNK
EEGIDLRKDAMALQRLREAAEKAKIELSSSAQTEINLPYVTATASGPKHLVRTMSRAKFE
QLIDDLVKRTIAPCETALKAAGLSKSDIDEIILVGGSTRIPAVQEAVEKFFGKKPSKGVN
PDEVVAVGAAIQGGVLTGDVKDVLLLDVTPLSLGIETMGGVMTKLIESNTTIPTKKSQVF
STAADNQPSVEIHVLQGERPMATDNKTIGRFHLDGIPPAQRGTPQIEVTFDIDANGIIKV
SATDKATNKSQDIRIEASSGLTEEEIKKMKAEAEANAESDKKAKETADKLNEADGMIFQT
EKQLKEFGEKLSDDKKKPIEDALEELKKAYEAKDLAMISPALDKINEAWKVASEEMYKAQ
AEGQQADASPNGEASADAGAKEGDNVEDVDFEEVK
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagattatcggaatagatttgggaacaaccaactcttgcgtttccgtaatggaa
ggtaacgagccagtagttatcccaaatgcagaaggaaaaagaacaacaccatccgttata
gcttttgtagaaggcggagagattaaggtaggtgaccctgcaaaacgtcaggcagtaacc
aacccaaccaaaactatatactctatcaagagatttatggggaataaattttctgaatct
agtaaagaggcaggaagagtaccttataaagtagtaaaaggagataatgatactccaaga
gttgatatcgatggccgtttgtattctccacaggaattatctgctatgattcttcagaaa
atgaagaaaacagcagaagactatttgggacaaacagttacaagagcggtgattactgtt
cctgcttactttaacgatgcacaaagacaggcgaccaaagaagctggtgaaattgcaggt
cttacagtagagcgtattattaatgagccaacagctgcatctttggcctatggtttggat
aagaaagataaagaacaaaaaattgtcgtatttgactttggaggtggtactcatgatgtt
tccattctagaactaggggatggtgtatttgaggtattgtctacagatggtgatacacac
ttgggaggtgatgatgttgaccaaaagatcatcgattggttggcagacgaattcaacaag
gaagaaggaatcgatttgcgtaaggatgctatggcattacaacgtttacgtgaggctgca
gaaaaagctaagatagaattatcttcatctgcccaaacagaaatcaacttgccctatgtg
acagccactgcttcaggaccaaaacacttggtgcgtacaatgtctagagctaaatttgag
cagttgatagacgatttggttaaaagaacaattgcgccttgtgagactgcccttaaagcg
gccggtttatcaaaaagcgatatcgatgaaattattttggtaggtggttctacaagaatt
cctgcggtacaggaagcagtagaaaagttcttcggaaaaaaaccatccaaaggtgtgaac
cctgatgaagttgttgctgtaggagctgcaatccaaggtggtgtattgacaggagatgtg
aaggatgtacttttattggatgtgacaccattgtctttaggaattgagaccatgggaggt
gtaatgaccaagttaattgagtctaatacaacaatccctactaagaagtctcaggtattc
tcaacagcggcagacaatcagccttctgtagaaatccatgtcttacaaggagaaagacca
atggcaacggacaataaaactatcggaagattccatttggacggtattccaccagcacaa
aggggaacacctcaaattgaagttacttttgatatcgatgccaatggtataatcaaggta
tcagcgactgataaggctaccaacaaatctcaggatatccgaattgaagcttcttctggc
ttgaccgaagaagaaatcaagaaaatgaaagctgaagcggaagcgaatgccgagtcggat
aaaaaagctaaagaaactgctgataagttgaatgaagctgatggaatgatcttccaaact
gaaaagcaactgaaagaatttggtgaaaaattatccgatgataaaaagaaaccaatcgaa
gatgctttggaagagttgaaaaaggcttacgaagctaaagatttggccatgatctctcct
gctttggacaaaataaatgaggcttggaaagtagcttctgaagaaatgtacaaagcacag
gcagaaggacaacaagcagacgcctcaccaaatggtgaagctagtgcagacgctggagcc
aaagaaggcgataatgtggaagatgttgacttcgaagaagtaaaataa
DBGET
integrated database retrieval system
