KEGG   Sediminicola sp. YIK13: SB49_05225
Entry
SB49_05225        CDS       T04145                                 
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
syi  Sediminicola sp. YIK13
Pathway
syi00260  Glycine, serine and threonine metabolism
syi00460  Cyanoamino acid metabolism
syi00630  Glyoxylate and dicarboxylate metabolism
syi00670  One carbon pool by folate
syi00680  Methane metabolism
syi01100  Metabolic pathways
syi01110  Biosynthesis of secondary metabolites
syi01120  Microbial metabolism in diverse environments
syi01200  Carbon metabolism
syi01230  Biosynthesis of amino acids
syi01240  Biosynthesis of cofactors
syi04981  Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:syi00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    SB49_05225 (glyA)
  09102 Energy metabolism
   00680 Methane metabolism
    SB49_05225 (glyA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    SB49_05225 (glyA)
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    SB49_05225 (glyA)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    SB49_05225 (glyA)
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    SB49_05225 (glyA)
Enzymes [BR:syi01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     SB49_05225 (glyA)
SSDB
Motif
Pfam: SHMT Beta_elim_lyase DegT_DnrJ_EryC1 Aminotran_1_2 DUF4853
Other DBs
NCBI-ProteinID: ALM07267
UniProt: A0A0S1SBS7
LinkDB
Position
complement(1178311..1179585)
AA seq 424 aa
MQRDNQIFELIEAEKERQLEGIELIASENFTSPQVMEAAGSVLTNKYAEGYPGKRYYGGC
EIVDEVEQIAIDRAKELFGAAYANVQPHSGSQANASVYHACLQPGDKILGFDLSHGGHLT
HGSPVNFSGRLYSPVFYGVDEETGVLNYDKIQEIATKEQPKMIIAGASAYSRDMDFKRFR
EIADSVGALLLGDISHPSGLIAKGILSDPLPHCHIVTTTTHKTLRGPRGGLILMGEDFDN
PFGIKLKNGSLRKMSALLDLAVFPGNQGGPLEHIIAAKAIAFGEALTDEFLHYMLQVKKN
AAAMAAAFMAKDYKIISGGTDNHMMLIDLRNKDITGKEAENVLVKADITANKNMVPFDDK
SPFITSGIRFGTAAITTRGLKEADMATIVEFIDTVLTNKDNEDLIEGVRDQVNELMRGKA
LFNA
NT seq 1275 nt   +upstreamnt  +downstreamnt
atgcagagagataatcaaatttttgaattaatagaggcggagaaggaacgtcaattggaa
ggcattgagttaatagcctctgaaaatttcaccagtccacaggtcatggaagccgctggt
tctgtgttgaccaacaaatacgcagaaggatatcctgggaaaagatattacggaggttgt
gaaatagttgatgaagtagagcagattgccatagatagggcaaaagagctttttggagct
gcctatgccaatgtacagccccattccggttctcaggccaatgcctctgtataccacgcc
tgtttacagcccggggataaaatattgggatttgatctttctcatggggggcatttgaca
catggttctccagtaaacttttcaggtcgcttgtattcacctgttttttatggtgtagat
gaggagactggggtattaaattacgataagatccaagagatcgccaccaaggaacaacca
aagatgattattgcaggggcgtctgcctactctagagacatggattttaaacgtttcagg
gaaattgcagatagtgtaggagctctcttgttgggagatatttctcacccttcaggtctt
attgctaaaggaatattgagtgatccccttccacattgccatattgtgaccacaaccaca
cacaaaaccttgagaggaccaagaggagggctaatcttgatgggtgaggattttgataac
ccatttggaataaaattgaaaaatggcagccttaggaaaatgtctgctcttttagattta
gcagttttcccgggaaatcagggtggacctttagagcacattattgcagctaaggcaatt
gccttcggagaggcattaacagatgaatttttgcattacatgttgcaggtgaaaaagaat
gccgccgctatggctgcagcctttatggccaaggactataaaattatttctggaggtaca
gacaatcatatgatgttgattgacctacgtaataaggatatcacagggaaggaagctgaa
aatgttttggtaaaagcagacatcacagcaaataaaaatatggttccttttgatgataaa
tccccttttataacttctggaatacgtttcggaacagctgcaatcactactagagggttg
aaagaggccgatatggccaccatcgtagaattcattgataccgtattgaccaataaagat
aacgaagacctaattgaaggagttcgtgatcaggtcaatgaattaatgagaggaaaggcg
ttgtttaacgcatag

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