KEGG   Sediminicola sp. YIK13: SB49_05310
Entry
SB49_05310        CDS       T04145                                 
Name
(GenBank) tRNA delta(2)-isopentenylpyrophosphate transferase
  KO
K00791  tRNA dimethylallyltransferase [EC:2.5.1.75]
Organism
syi  Sediminicola sp. YIK13
Pathway
syi01100  Metabolic pathways
syi01110  Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:syi00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:syi01006]
    SB49_05310
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:syi03016]
    SB49_05310
Enzymes [BR:syi01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.75  tRNA dimethylallyltransferase
     SB49_05310
Prenyltransferases [BR:syi01006]
 Compound prenylation
  tRNA dimethylallyltransferase
   SB49_05310
Transfer RNA biogenesis [BR:syi03016]
 Eukaryotic type
  tRNA modification factors
   Other tRNA modification factors
    SB49_05310
 Prokaryotic type
    SB49_05310
SSDB
Motif
Pfam: IPPT IPT AAA AAA_28 AAA_33 nSTAND3 IstB_IS21 SRP54 AAA_22 ABC_tran AAA_2 AAA_5 AAA_16 RNA_helicase ResIII NACHT PhoH Cytidylate_kin DO-GTPase2 AAA_25 AAA_23
Other DBs
NCBI-ProteinID: ALM07283
LinkDB
Position
1196693..1197604
AA seq 303 aa
MADKWLISIVGPTGIGKTSLAIKLAQYFETEIISADSRQFFKEMTIGTAVPSKEELGAIK
HHFIQNISIFDEYSVGDFERDAIALLHGLFKKKNIVIMVGGSGLYIDVVTKGLDKFPEVD
PNIRTELNKLLEEQGITVLQEQLSNLDPVYFNKVDTENPHRLIRALEICLGTGKPFSAFL
KQKKVKRDFKTISIGIDAERHVIYERINQRVDLMVEAGLVDEVRTLEPHKSFNALQTVGY
RELFKYFEGDWTLDFAILEIKKNTRRFAKRQLTWFKKNENTIWVDYQEDLPSVVGKIKQK
FKI
NT seq 912 nt   +upstreamnt  +downstreamnt
atggctgacaaatggctaatatcaattgttggtccaacgggcataggtaaaacatctttg
gctatcaaactggcccagtactttgaaacagagatcatatcggccgattctaggcagttt
tttaaggaaatgaccattggcacagcagttccctcaaaagaagagctaggggcgataaaa
catcattttatccaaaacatcagcatctttgatgaatattctgttggagattttgaaagg
gatgccattgctttactacatgggctattcaaaaaaaagaacatcgtgatcatggttgga
ggcagcggactctatattgatgttgtaacaaaaggactggacaagtttccagaagttgac
cctaatatcaggacagaactaaacaagcttttggaagaacagggtattaccgtattgcaa
gaacaattgtccaacctggatccggtctacttcaacaaagtggatacagaaaatccccat
cgattaataagggcccttgaaatatgcctgggaactggaaaacctttttcagctttttta
aagcagaaaaaagtaaaaagggattttaagaccattagtattggcatagatgcggaacgt
catgttatttatgaacgcatcaaccaacgcgtagatttaatggtagaagcgggtttggta
gatgaagttaggacccttgaaccacataaatcatttaatgcccttcaaactgttggttat
agggaacttttcaaatattttgaaggagattggactttggatttcgccattttagaaatc
aaaaagaataccagaagatttgcgaaaagacaattgacatggttcaagaaaaatgaaaat
acaatttgggtagactatcaggaggacttaccttccgtagtaggcaaaattaagcaaaag
tttaaaatataa

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