Sediminicola sp. YIK13: SB49_05885
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Entry
SB49_05885 CDS
T04145
Name
(GenBank) antibiotic ABC transporter ATP-binding protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
syi
Sediminicola sp. YIK13
Pathway
syi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
syi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SB49_05885
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
syi02000
]
SB49_05885
Enzymes [BR:
syi01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
SB49_05885
Transporters [BR:
syi02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
SB49_05885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Zeta_toxin
RsgA_GTPase
ABC_membrane_2
ABC_ATPase
AAA_22
AAA_29
nSTAND3
AAA
AAA_16
MMR_HSR1
DEAD
APS_kinase
AAA_25
G-alpha
AAA_24
DUF815
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ALM07384
UniProt:
A0A0S1SA71
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All DBs
Position
1311566..1313392
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AA seq
608 aa
AA seq
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MEYFKKILRFAKPYQKYGYLNIFFNILYALFSALSFAALIPMLDVLFKQDKKVFEEPTYT
DLGHLKDYLQEYINFRVTAYSGNDEMKGLVLVIGLVLILFLMKNFFNYLAMYYITFLRNG
VLKDIRNKMYQKIVELPISYYSEKRKGDVIARITSDVLEIQHSFLSVLELIVREPLTIIF
TIIIMFGISTKLTLFVFIFIPLAGMIISRIGKSLKKKSDRVQKESGEFLSIVEETLGGLR
VIKAFNAESKFQKTFNTSTYRFFDFSNKLLNRQNLASPTGEFLGILVIGVLLWFGGKMVL
IDKTLDASSFIAYMGLAYNILTPAKAISKASYGVKKGDAAAERVLEILETENPIGEIENP
IHKSTFESGVSIENVSFKYEDEYVLKNFNLTVPKGHTVALVGQSGSGKSTIANLVTRFYD
VNEGIIKIDDTDIKHLTKNSLRNLMGLVTQDSILFNDTVRNNIGLGKENATDEEIIEAAK
IANAHEFITQLPNGYGTNIGDSGNKLSGGQKQRLSIARAVLKNPPLMILDEATSALDTES
ERLVQDALEKMMKNRTSIVIAHRLSTIQNANTIIVLQKGEIVEQGSHIELLESNGVYKKL
VNMQSFDA
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggagtattttaaaaaaatccttcggtttgccaagccttatcagaaatatggctactta
aatatattctttaatattctttatgcgctttttagtgccctgtcttttgccgctcttatc
cccatgttggatgtgctctttaaacaggataaaaaggtttttgaggaacccacgtataca
gatttgggtcatttgaaggattatttacaggaatatatcaatttcagggttaccgcgtat
tctgggaatgatgaaatgaaagggctggtattggtcattggattggtattgatcctgttc
ctaatgaagaatttcttcaattacctggccatgtattatatcacctttctaaggaatggg
gttttaaaggatatcaggaacaaaatgtaccagaaaattgtggagctgcctatttcttac
tattcagaaaagagaaaaggggatgtaatagccaggattacctctgatgtacttgaaatt
cagcattcctttctttccgttttggaattaatagtcagggaaccgcttaccattatattt
accataataatcatgtttgggatcagtaccaagctcaccctgttcgtatttatttttatt
cccttagcgggcatgatcatttccagaataggaaaatcattaaaaaagaaatcggaccgt
gtccagaaagagtccggggaatttctatccattgtagaggaaaccttaggggggctacga
gtcattaaggcatttaatgcggaatccaaattccagaaaaccttcaatacgtccacatat
cgcttttttgatttctccaataaattgctcaataggcaaaacctggcctccccaacaggg
gaattcttagggattttggtcattggtgttttactatggtttggtggaaaaatggtgttg
atagacaaaaccctagatgcctcctcctttatagcctatatgggattggcctacaacatc
cttactcccgcaaaagcgatcagcaaagcctcttacggtgttaaaaaaggtgatgcagca
gctgaacgcgtattggaaattttggaaaccgaaaatcctatcggggagattgagaatcct
atccacaaaagcacttttgagagtggagtgtccattgaaaatgtatcctttaaatacgag
gatgaatatgtccttaaaaacttcaatctcacggtcccaaagggacacaccgttgctcta
gtaggtcagtcgggaagtggaaaaagtaccatagcaaacctagtgacgcgcttttacgat
gtgaacgaaggcattattaaaatagacgataccgatataaagcatctcaccaaaaactct
ctccgcaatttaatgggactagtaacacaagattccattttgttcaatgatactgttcgt
aacaacattggactgggaaaagaaaatgctacggatgaggaaataattgaggcagcaaag
attgcaaatgcccacgaatttattacacaacttcctaacggttatggcactaatattggg
gacagcggaaacaagttaagcggaggacaaaagcaacgattgtccattgcaagggctgta
cttaagaaccctcccctaatgatattggatgaagcaacttctgccttggatacggaaagt
gaacgattggtacaggacgcactggaaaaaatgatgaagaacagaacctccatagtcatt
gcccatcgcttgtccaccattcaaaatgcaaatacgatcatagtgttgcaaaaaggagag
atagttgaacagggctcacatatagagctcctagaatctaatggagtttacaaaaaatta
gtgaacatgcagtcatttgatgcataa
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