Sediminicola sp. YIK13: SB49_06585
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Entry
SB49_06585 CDS
T04145
Name
(GenBank) DNA mismatch repair protein MutL
KO
K03572
DNA mismatch repair protein MutL
Organism
syi
Sediminicola sp. YIK13
Pathway
syi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
syi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SB49_06585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syi03400
]
SB49_06585
DNA repair and recombination proteins [BR:
syi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Molecular matchmaker
SB49_06585
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
DUF6713
Motif
Other DBs
NCBI-ProteinID:
ALM07506
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Position
complement(1492817..1494664)
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AA seq
615 aa
AA seq
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MGDIIKLLPDHVANQIAAGEVVQRPASVVKELMENAIDAGATSIKLIIKDGGKVLIQVVD
DGVGMSDTDARLSFERHATSKIQCAEDLFNLSTKGFRGEALASIAAIAHVELQTKPSDTE
VGTHIKIEGSKIAAQEVIVTPKGTSIAVKNLFFNIPARRNFLKSNSVELRHITDEFHRVA
LAHPSIHFYFYNNGSELFNLPLSNYRQRIVNIFGSKTNEKLVPVEEETQVVKISGYIGKP
EFAKKSRGEQYFFVNNRFIKSPYLHHAVVAAFEGLIKSENHPGYFLYLEVDPASIDINIH
PTKTEIKFDDEHTLYALLRSAVKHSLGQFNVAPALDFDQDLNLETPYAFKNRTAELPKVV
VDSGFNPFKEEMQRGFRNSHQKESTKGWESMYVGLESKVGKEDSFSSVSFESDSITGSIF
DGSQEVMESTTTTFQLRRKYIVTTIISGMVVIDQSRAHQRVLYEKFLKNITIKEAVSQQL
LFPLTLSFSSSDMAIIEEIKESLATIGFGFGKADKEVLEITGVPLLVAESEVGMVLDQLI
ADYQQDVAGDNFSQTDILSKTLCKTLAVKTGEVLDKNSQLALVNDLFACKESKVSPFNKT
IYITITENDIDKKFI
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgggcgatatcattaaacttttaccagatcatgttgccaaccaaatagctgccggtgag
gtggttcaaagaccagcttcagtagttaaagagttgatggagaatgccatagatgcaggg
gccacctccataaagcttattattaaggatgggggcaaagtcctgatacaagtggtagat
gatggtgttggaatgagtgataccgatgccagactcagtttcgaaaggcatgctacctcc
aaaattcaatgtgcagaagatcttttcaaccttagtaccaaaggtttcaggggggaggct
ttggcttcaatagcggcaatagcccatgtagaactgcagaccaaaccttccgatacagaa
gtaggtacccatataaaaatagaggggagtaaaattgcggcgcaggaagtgattgttacc
ccaaaaggaacttccattgcggtaaaaaaccttttttttaatattcccgcccgaagaaat
ttcctaaaatccaatagtgtggaacttaggcatatcaccgatgagtttcatagggtagct
ctggcacatccttccattcatttctatttttacaacaatggtagcgaattgtttaatttg
cccctgagcaattataggcaacggatagtcaatatctttggcagtaagaccaatgaaaaa
ttagtccctgttgaagaagagactcaggtggtgaaaatttccggatacattgggaaacct
gagtttgccaagaagagtaggggagagcaatactttttcgtcaataaccgctttattaaa
agtccctatctccatcatgccgtggtggcagcgtttgagggactcataaaatctgaaaac
cacccaggttatttcctatacttagaagtggatcctgcgtccatagatattaatattcat
cctaccaaaaccgagatcaaatttgatgatgagcataccttgtatgccctattgaggtct
gccgtaaaacatagtttgggacagttcaatgttgccccggccttggattttgatcaagac
cttaatttggaaacgccttatgcctttaaaaataggactgcagaactacctaaagtggtt
gtggattcaggattcaacccctttaaagaggaaatgcagagaggttttaggaattcccat
caaaaggagagtaccaaaggatgggaaagtatgtacgttgggttggaatccaaagttggg
aaagaagatagtttctcgagtgtaagttttgaatctgatagtataacgggttccattttt
gatggtagtcaggaagtaatggagtctacgacaaccacttttcagttaaggcgaaagtat
attgtgaccaccatcatttctggaatggtcgtaatagatcaaagccgggcacaccaacgt
gtactttatgagaagtttttaaaaaatattaccataaaagaggcagtaagccagcaatta
ttattcccattgaccttgtccttctctagttcagacatggccataattgaggagatcaag
gaaagtctagctaccataggatttggtttcggtaaagcagacaaggaggtactggaaatt
accggggttcctttattagtagcagaaagtgaggtaggtatggttttggatcaattaatt
gcagactaccaacaggatgttgcaggtgataatttttcacagacagatatcctttccaaa
accctctgtaagacactggcggtaaagacaggggaggtgttggacaaaaattcgcaactg
gccctggtgaacgatttgttcgcctgtaaggagtccaaggtgagccctttcaacaagaca
atttacattacgatcacagaaaacgatattgataaaaaatttatttaa
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