Sediminicola sp. YIK13: SB49_06735 Help Entry SB49_06735        CDS       T04145                                  Name (GenBank) ATP-dependent RNA helicase RhlE   KO K11927   ATP-dependent RNA helicase RhlE [EC:5.6.2.7] Organism syi  Sediminicola sp. YIK13 Pathway syi03018   RNA degradation Brite KEGG Orthology (KO) [BR:syi00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     SB49_06735  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:syi03019]     SB49_06735 Enzymes [BR:syi01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.7  DEAD-box RNA helicase      SB49_06735 Messenger RNA biogenesis [BR:syi03019]  Prokaryotic type   Bacterial mRNA degradation factors    RNA degradosome components     Helicases      SB49_06735 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD Helicase_C ResIII AAA_19 UvrD-helicase P-loop_SecA AAA_22 CMS1 ERCC3_RAD25_C UTP25_NTPase-like Motif Other DBs NCBI-ProteinID:  ALM07531 LinkDB All DBs Position complement(1527419..1528684) Genome browser AA seq 421 aa AA seqDB search MSFKSLGLSDALLKAVDKKGYNTPSPIQEKAIPQILERKDVLASAQTGTGKTAGFTLPIL QILSQAPVLRKRPVRTLVLTPTRELAAQVYANIKEYSEFLDIRSAVIFGGVNAKPQIATL RNGVDILVATPGRLLDLQGQGALSLNSVEILVLDEADRMLDMGFLRDIKRILNLMPAKRQ NLLFSATFSKEIKKLAGGFLHHPVLVEATPENTTAEKVDQQVYRVDKIRKSELVIKLIGE GEWQQVLVFTRTKHGANRLSEKLNKNDITAAAIHGNKSQGARTKALDGFKKGSVRVLVAT DIAARGLDIPLLPHVINFELPNVPEDYVHRIGRTGRAGASGEALSLVSQDEMEYVRGIEK LLGLKLPSAVLEGFEPSGRPEKDEEDDRGPRQRNPRTKAKQGSGNKKPNRFKSRSGGNRN S NT seq 1266 nt NT seq  +upstreamnt  +downstreamnt atgtcatttaaatctttgggcctatccgacgccctgttgaaagctgtcgacaaaaaagga tacaacaccccttcgcctattcaggaaaaagcaataccacaaatattagaaagaaaagat gttttagcctccgcacaaacgggtacgggtaagacagccggttttacattacctatttta caaatcctgtcccaggctccagtcttgcggaaaaggcctgtacggaccctagtgcttacg ccgacaagggaattggctgctcaggtatatgcaaatattaaggaatacagtgagttttta gatattaggtccgctgttatttttggaggtgtcaatgccaaaccacaaattgcaacgtta cgcaatggggttgacattttagtggccactcctggcagattactggatcttcagggccaa ggggcactatctttgaacagtgttgaaatattggtcttggatgaggctgatagaatgttg gatatgggtttccttagggatattaaaagaatcttgaaccttatgccggccaagagacag aatctattgttctcggctaccttttcgaaggaaataaaaaaattggcaggcggattcttg caccatccagtattggtggaggccactccagagaatacaactgctgaaaaggtagaccaa caagtttatcgagtagacaaaatcagaaaatccgaactggtcattaagttgatcggcgag ggcgaatggcaacaggtacttgtctttactaggaccaagcacggtgccaatagattgagt gaaaagttgaacaaaaacgatattaccgctgccgccattcatggaaataaaagccaaggg gcaaggaccaaggcactggacggttttaaaaaaggaagcgttagggtgttggtagcaact gatattgctgcacgtggattggatatcccattgttgccacatgtgatcaactttgaactt cccaatgtcccggaagattatgttcatagaataggtagaaccggtagggcgggagccagt ggggaagccctttctttggtgtcccaagatgaaatggaatatgtcagagggatagagaaa ttattgggattaaaattgcccagtgccgtgttggagggttttgagccaagtggcaggccg gagaaggacgaagaagatgatagaggcccgagacaaagaaacccaaggacaaaagcgaaa caaggttcaggaaataagaaacccaatagatttaaaagtagatctggcggaaatagaaat tcttaa

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