Sediminicola sp. YIK13: SB49_07240
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Entry
SB49_07240 CDS
T04145
Name
(GenBank) ABC transporter
KO
K18889
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
syi
Sediminicola sp. YIK13
Pathway
syi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
syi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SB49_07240
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
syi02000
]
SB49_07240
Transporters [BR:
syi02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
SB49_07240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
nSTAND3
AAA_21
RsgA_GTPase
DUF87
AAA_18
AAA_16
ATP-synt_ab
AAA_23
DUF4014
MMR_HSR1
DEAD
NACHT
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
ALM07620
UniProt:
A0A0S1SBX6
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Position
1632913..1634670
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AA seq
585 aa
AA seq
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MKELKYINKYFKKYWGKLVLGIIITIIARIFSLVMPPYVNKSIKAMEDYLTGDRSNLDLV
KGELLQYILIIIGAALLSGFFTFLMRQTIINISRYIEYDLKNEVYDHYQYLNLSFYKKNR
TGDLMNRISEDVTQVRMYAGPAIMYGIQTLTLFACLLPIMFIKAPTIAFYTLLPLPILSI
LIYNISKIIHKKSTIVQQYLSTLSTFTQESFSGITVIKAYGLEPQISKELVGLANEGKDK
SMDLAKVNAWFFPLMILLIGISNIFVIYIGGKQYINGEIESMGIIAEFIIYVNMLTWPVA
VVGWLTSIVQSAAASQERINEFLNVQPDIRNEIKEETPIQGKITFNDVTFTYDDTNITAL
KNISFTVNNGETVAIIGKTGSGKSTILDLIARLSDVSSGEILIDDVPIKNLNLNSLRKAV
GAVPQDAFLFSDTIKNNIKFGKEDATDEEIIEVAKNSVVHKNIMGFSKNYDTILGERGIT
LSGGQKQRVSIARALLKDPQIYLFDDCLSAVDTETEEEILNNLKKASRNRTTLIVSHRVS
SAKNADKIIVLEDGKILQEGTHDILISKEGYYKELYHNQLSEKEN
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaacttaaatatatcaataagtattttaaaaaatactggggaaaactggtttta
ggaattatcattaccattattgcccgtattttttcattggtaatgcccccttatgtaaac
aagtccatcaaggccatggaggactacctcacgggtgaccgcagtaatttggacttggtg
aaaggggaattgttacaatatatacttatcatcataggcgctgctctgctttctggcttt
ttcacgtttttaatgaggcagaccattattaatatttctaggtatattgaatacgatttg
aaaaatgaggtatatgaccactatcaatatttaaatctaagtttttataaaaaaaataga
acgggcgatttaatgaaccgtatcagtgaagatgttactcaggttaggatgtatgccgga
cctgccatcatgtacggtattcagaccctgaccctattcgcttgtttattgcccataatg
ttcataaaagcgcccactattgccttttatacgttattgcctctacctatcttatctatc
cttatctataatatcagtaagatcattcacaaaaaaagcaccatagtacagcaatattta
tccaccttatccacttttacccaagagtctttctcagggatcaccgtgatcaaagcatat
ggtttggagcctcagataagtaaggaattagtaggtttggccaatgaaggaaaagacaaa
agcatggatctggcgaaagtcaacgcttggttttttcccttaatgattttgcttatcggg
atcagcaatatattcgtgatttatattgggggaaaacagtacattaatggggagatagaa
tctatggggatcatagcagagtttatcatatatgtgaacatgctcacctggcccgtagca
gttgtgggatggctcacctccattgttcagagtgccgcagcttctcaggagcggatcaac
gaattcttaaatgtacaaccggacataagaaacgaaataaaggaggaaacccccatccaa
ggaaaaataaccttcaatgatgttactttcacctatgatgataccaatattacagcttta
aaaaatatctccttcaccgttaataatggggaaactgtggccatcattggaaagacagga
tcaggaaaatctaccattttagaccttatcgcaaggttaagcgatgttagctcaggtgaa
atattgattgatgatgttcccattaagaacctaaaccttaatagcctccgtaaagccgta
ggggcagttccacaggacgcctttcttttttcagacaccattaagaacaatattaaattt
ggcaaggaagacgccacggatgaggaaatcatagaagttgcaaaaaactcggtagtccac
aaaaacattatgggcttctccaaaaactacgacaccatccttggggaacgcggcattacg
ttgagtggtggacaaaaacaacgggtatctatcgccagggcactgttaaaagatccacag
atatatttatttgatgactgcctgtccgcggtggacacggagaccgaagaagaaattttg
aacaacctaaaaaaagcatcccgtaacaggaccacactgatagttagccatagagtatcc
tctgcaaagaatgcagataaaattattgtcctggaagatggaaagatattacaggaaggc
acacatgatattttgataagtaaagaaggttactacaaagagctataccacaaccagcta
tcggagaaagaaaactag
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