KEGG   Sediminicola sp. YIK13: SB49_07700
Entry
SB49_07700        CDS       T04145                                 
Name
(GenBank) pseudouridine synthase
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
syi  Sediminicola sp. YIK13
Brite
KEGG Orthology (KO) [BR:syi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:syi03016]
    SB49_07700
Enzymes [BR:syi01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     SB49_07700
Transfer RNA biogenesis [BR:syi03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    SB49_07700
 Prokaryotic type
    SB49_07700
SSDB
Motif
Pfam: PseudoU_synth_1 DUF2344 PnpCD_PnpD_N
Other DBs
NCBI-ProteinID: ALM09220
UniProt: A0A0S1SGG3
LinkDB
Position
complement(1735205..1735954)
AA seq 249 aa
MRYFVAFSYFGKSYHGWQKQPNALTVQQVLEETFSTLLRQPVELMGAGRTDAGVHARQMY
AHFEVDEIVDKEELCYRMNSFLPDDIAISGIYEVPDNAHARFDAEERTYEYWIVQEKNPF
HMDTAHYIKFGLDLETMNEAASLLLKHTDFECFSKSNTDVKTFLCKLKKAEWTIQGDVLV
FTITADRFLRNMVRAIVGTLLEVGLGKCTLAGVEEIINSKDRSKAGVSVPAKGLYLTKVS
YPSHIKLKL
NT seq 750 nt   +upstreamnt  +downstreamnt
ttgagatattttgtcgccttttcatacttcgggaagtcttaccatggatggcaaaaacag
cccaatgcattgacggttcaacaggtcttggaagaaacattttccaccttgttaagacag
ccggttgagttgatgggtgcgggaagaacggatgctggggtacatgcaaggcaaatgtat
gcccattttgaggtagatgagatagttgataaagaagaactttgttaccgtatgaattct
tttttaccggatgatattgcaatcagcggtatttatgaggttcctgataatgcccatgcc
cgctttgatgcagaggagaggacatatgaatattggattgttcaagaaaaaaatccattt
catatggatacggcccattatattaaatttgggttggatttggaaacgatgaacgaagcg
gcttccttattgttgaagcatacagattttgaatgcttttcaaaatcaaataccgatgta
aagacctttttgtgtaagctaaagaaggcagaatggactattcagggagatgttttggtt
tttaccattacagcggaccgattcttgagaaatatggtacgggcaatcgtagggacatta
ttggaagttggacttggcaaatgtactttggcaggcgttgaagaaataataaatagtaag
gataggagcaaagctggggtttctgtacctgcaaaagggttgtacttgacaaaggtgagc
tatccttcacatataaaattgaagttataa

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