Sediminicola sp. YIK13: SB49_09200
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Entry
SB49_09200 CDS
T04145
Name
(GenBank) membrane protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
syi
Sediminicola sp. YIK13
Brite
KEGG Orthology (KO) [BR:
syi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
syi02000
]
SB49_09200
Transporters [BR:
syi02000
]
Other transporters
Pores ion channels [TC:
1
]
SB49_09200
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
DUF748
GOLD_2
Nucleopor_Nup85
Motif
Other DBs
NCBI-ProteinID:
ALM07953
UniProt:
A0A0S1SBM3
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All DBs
Position
2064948..2066291
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AA seq
447 aa
AA seq
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MKTSSYIAKVLMTLLLTLAFSADAHSQILKKLRKRAEKAAERTVERRVDRETQEKTDEVL
DSILEPGKKGEKTSKQEPLPTIVGGQETRTGGSNPNNNSQSGEAGNIGSESIAVYSKFDY
VPGDQIIFYDDFTKDFIGDFPSKWNTNGGGEVVTMNDSPEKWMELLPGYNIYYIPDVPKL
PEDYTIEFDVMAVGLSNKTSSTATLRIALSDDDKFKEGANFVHAQLPFCQYAAVGITMSN
HINNKREIYSVVRADLREEVLQRPHVSVAVNKQRFRLWVNEEKHIDIPRIVPEGAVLTTL
KFHMNNFKDGEERLFITNLKVAEGGLDLRRQLISDGKVSTNGILFDPGSDQIKPQSLGII
RQISQVLIQEGAMNLNIVGHTDADGDAGANLLLSKDRAQAVKNALVQVYGIDGSRLTTEG
RGEAEPVGDNSTTEGKAQNRRVEFIKT
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaagcagctacatagcaaaggtccttatgaccctattattaacgttggcattt
tctgccgatgcccattcccagattcttaagaaacttagaaaaagagctgaaaaagccgcg
gagcgtactgttgaaagacgagttgatagagaaacacaggagaagacagatgaagtgttg
gacagtattttagaacctggcaaaaagggtgagaagacgtcaaaacaagaacccttaccc
acaatagttggagggcaagaaacgagaactggaggcagtaatcccaataacaatagtcaa
tcaggcgaagctggtaatatcggttcggagagcatcgctgtttacagcaaatttgattat
gtacctggtgatcaaatcatattttatgatgacttcacaaaggattttattggcgatttt
ccctctaaatggaataccaatgggggcggtgaagtagtaaccatgaatgattctcctgaa
aaatggatggaattacttcccggttataatatttactacataccagatgtaccaaagtta
ccagaagattatactatagaatttgatgtgatggctgtgggattaagtaataaaacgtct
tcaacggcaaccttgcgtatagctttaagcgatgacgataaatttaaggaaggggccaat
tttgtgcatgctcaattgcctttttgtcaatatgcggctgtaggtataacgatgtctaac
cacatcaacaacaagcgagaaatatatagcgttgtcagagcggatctcagagaggaagta
ttacaacgcccacatgtttccgttgcagtaaacaaacaacgttttagactgtgggtcaat
gaagaaaagcacatagatattccaagaattgttccggaaggtgctgttcttactacctta
aaatttcacatgaacaacttcaaagatggggaagagcgcttgttcattaccaatttaaaa
gtagcagaaggagggttggatctaagaagacaactcatttcagatggaaaagtatcaact
aatggtattctttttgacccaggttctgaccaaatcaaaccacaatccttgggcatcatt
cgtcaaatctcacaggttttaatacaagagggcgctatgaatttaaatattgtagggcat
accgatgctgacggggatgcaggagcaaatcttttattatcaaaagaccgagcgcaagca
gtaaagaatgctttggtacaagtttatggaattgatggatcaaggttgaccaccgaagga
aggggtgaggccgaaccagttggtgataattctactacagaaggaaaggcccaaaataga
agggttgaatttataaaaacataa
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