Sediminicola sp. YIK13: SB49_09355
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Entry
SB49_09355 CDS
T04145
Name
(GenBank) hypothetical protein
KO
K09953
lipid A 3-O-deacylase [EC:3.1.1.-]
Organism
syi
Sediminicola sp. YIK13
Pathway
syi00540
Lipopolysaccharide biosynthesis
syi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
syi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
SB49_09355
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
syi01005
]
SB49_09355
Lipopolysaccharide biosynthesis proteins [BR:
syi01005
]
Lipid A
SB49_09355
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxR
Ntox23
Motif
Other DBs
NCBI-ProteinID:
ALM07982
UniProt:
A0A0S1SCD7
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All DBs
Position
2099548..2100414
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AA seq
288 aa
AA seq
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MDKDSVKIVRHQLELRHDNDFLTFTDRYYSSGLFLTYRQQLQKGIFSSGKEQLKFSVRQE
IYTPSDIKSRDIADLDRPYVGFLGIQAGWSHIKNSNLLETDLLIGVAGPASGASGFQKWY
HNTFVVSDPPVWGNQMENSVHTNIYTSYLKEWQLSPNPFSVHMSLKPHIAFGTRDIYVHP
EFMATFGRRDPLSSSMVQNRLGTLDREIFFSLMAGHRFVHHNALLEGKIWGDDSDLVVEA
DRNVWYFGFDFKHRFGKNNYWAGYRINTPESSGTKSHRYIVLSYARSF
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggacaaagattccgtgaaaattgtgcggcaccaattggaattgagacacgacaatgat
tttttaacttttacggaccgttactattcctctggcctatttttaacgtaccgccaacaa
ttgcaaaaaggaatattttcctctggcaaggaacaactcaaattttcagttaggcaagaa
atatataccccttctgatatcaaatcacgggatattgctgatttggacaggccctatgtt
ggctttctaggcatccaggcaggatggtcacatataaaaaattccaatcttttggagacc
gatctgctaattggtgttgccggccccgcatcgggagcaagtggatttcaaaaatggtac
cacaatacctttgtggtttccgatcctccagtatggggcaatcaaatggagaatagcgtt
catacaaatatctatacaagctatttaaaagaatggcaattgtcacccaacccctttagc
gtacatatgtccctaaagccacatattgcttttgggaccagggatatttatgtgcatccg
gaatttatggccacctttggaagaagggatcctttatcctccagcatggtacaaaaccga
ttgggaaccctggaccgtgaaatatttttttccctaatggcaggccataggtttgtgcat
cacaatgctttgttggaaggtaaaatatggggcgatgattctgatttagtagtggaagca
gatagaaatgtttggtatttcggctttgattttaagcaccgttttggcaaaaataattat
tgggcggggtatcgcatcaacactcctgaatcctcaggtacaaagtcccacaggtatatt
gttctttcctatgccaggagcttttaa
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