Sediminicola sp. YIK13: SB49_09475
Help
Entry
SB49_09475 CDS
T04145
Name
(GenBank) biotin carboxylase
KO
K01959
pyruvate carboxylase subunit A [EC:
6.4.1.1
]
Organism
syi
Sediminicola sp. YIK13
Pathway
syi00020
Citrate cycle (TCA cycle)
syi00620
Pyruvate metabolism
syi00720
Other carbon fixation pathways
syi01100
Metabolic pathways
syi01120
Microbial metabolism in diverse environments
syi01200
Carbon metabolism
syi01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
syi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SB49_09475
00620 Pyruvate metabolism
SB49_09475
09102 Energy metabolism
00720 Other carbon fixation pathways
SB49_09475
Enzymes [BR:
syi01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.1 pyruvate carboxylase
SB49_09475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Dala_Dala_lig_C
ATP-grasp
RimK
GARS_A
ATPgrasp_ST
ATP-grasp_3
ATPgrasp_Ter
Motif
Other DBs
NCBI-ProteinID:
ALM09247
LinkDB
All DBs
Position
2125399..2126841
Genome browser
AA seq
480 aa
AA seq
DB search
MKKILVANRGEIAIRVMRTAQKMGIKTVAIYSTIDRNAPHVRFADEAVCIGEPPSNESYL
LGSKIIKVAKELQVDAIHPGYGFLSENAAFAEEVEQNNIIFIGPNSDAIRIMGSKLAAKD
AVKDYGIPMVPGIDRAITDIDKAKEIGKKIGFPILIKASAGGGGKGMRIVEKESDLESQM
KRAISEATSAFGDGSVFIEKYVASPRHIEIQVMADTHGNIIHLFERECSIQRRHQKVVEE
APSSVLTPELRAEMGEAAVKVAQACNYIGAGTVEFLLDENHNFYFLEMNTRLQVEHPVTE
LITGMDLVELQIRVARGEKLPIAQKDLKIKGHALELRVYAEDPLNDFLPSVGHLDTYVLP
EGEGIRVDNGFEEGMDIPIYYDPMLAKLITYGKTREEAIQLMISAIDRYQVAGVETTLAF
GKYVFEHESFRSGAFDTHFVKNYYSPEALKSAKEEEAKIAAMIALKQYMEDQKILRLPIQ
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
ataaaaaaaatactggttgccaaccgcggtgagattgccattagggttatgagaaccgcc
caaaaaatgggtatcaaaacggtggctatctattctaccatagacagaaatgccccccat
gtaagatttgccgatgaggccgtatgtataggggagccgccatccaatgaatcctacctc
ttaggttccaaaatcatcaaggtagccaaggaacttcaagtagatgccattcaccctggg
tatgggttcctcagcgagaatgcagcttttgcggaagaagtggaacaaaacaatatcatt
tttataggtcccaattcagatgccattagaataatgggcagcaagttagcggccaaggat
gccgttaaggactatggcattcccatggttccaggaatagacagagccataacggatatt
gacaaggccaaggaaattggaaagaaaattgggttcccaattctgatcaaagcctctgca
ggtggcggtggaaaagggatgcggatcgttgaaaaggaaagtgacctggaatcccagatg
aaaagggccattagtgaagcgacttctgcttttggggatggttccgtttttatagaaaag
tacgtggcctcgccaagacatatagaaattcaggtgatggcagatacccatgggaacatc
atccatctttttgaaagggagtgcagtattcaacgacgacaccaaaaggtagtggaagaa
gccccgtcttccgtactgaccccagaattacgggcagaaatgggagaagcggcggtaaaa
gtagcacaagcctgtaattatataggcgcgggaactgtggaatttctattggatgaaaac
cataatttttactttctggagatgaataccaggttacaggtggaacatccggtgacggaa
ctgatcactgggatggatttggtggaactacagataagggtggctaggggcgaaaaactt
cctatcgcacaaaaagatctgaaaataaaaggacatgccttggaattacgggtttatgcc
gaagacccattaaatgactttttaccgagtgtgggccatttggacacctatgtactacca
gaaggtgaaggcatacgtgttgataatgggtttgaggaaggcatggatattcccatctac
tacgaccccatgttggcaaaactgatcacctacggaaaaacaagggaagaggccattcaa
ttgatgatttcggccattgaccgctaccaggtggccggcgtggagaccaccttggcgttt
ggcaaatatgtttttgaacatgaatccttccgctctggtgcttttgacacccactttgtg
aaaaattattattctccggaagccttaaaaagtgctaaggaagaagaggctaaaattgcg
gccatgattgccttaaaacaatatatggaagatcaaaaaattctaagattgccaattcag
taa
DBGET
integrated database retrieval system