Sediminicola sp. YIK13: SB49_09730
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Entry
SB49_09730 CDS
T04145
Name
(GenBank) hemolysin
KO
K03699
magnesium and cobalt exporter, CNNM family
Organism
syi
Sediminicola sp. YIK13
Brite
KEGG Orthology (KO) [BR:
syi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
syi02000
]
SB49_09730
02042 Bacterial toxins [BR:
syi02042
]
SB49_09730
Transporters [BR:
syi02000
]
Other transporters
Pores ion channels [TC:
1
]
SB49_09730
Bacterial toxins [BR:
syi02042
]
Type II toxins: Membrane damaging toxins
Pore-forming toxins, Other
SB49_09730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CNNM
CorC_HlyC
CBS
DUF3870
Motif
Other DBs
NCBI-ProteinID:
ALM08050
UniProt:
A0A0S1S5S7
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All DBs
Position
complement(2189452..2190741)
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AA seq
429 aa
AA seq
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METSIIVIVATLLLSAFFSGMEIAFISANKIHIEIEKKQEGILAKVLTRLTRKPSKFIAS
MLIGNNIALVVYGFYMGDLLMQWFQGLYPSPYGLVNIMLTDFSLVAQTIISTLVILFTAE
FLPKVLFQIYSNTLLKLLAVPAYLFYILFSVISEFVIWVSDFILKAFFKTDGDEVQLAFS
KIELGDYITEQMETVEEEDEVDSEIQIFQNALEFSAVKAREVMIPRTEITAVELHEKPKN
LVKLFTETGFSKILIYKDTVDNIIGYVHSYELFKKPKTIKSVLLPVEFVPETMMISDILN
VLIKKRKSIAVVLDEYGGTSGIMTVEDIVEELFGEIEDEHDSTDLLEEKIDENNYKFSAR
LEVDYINENYKLNLPESDEYETLGGLIVNETGEIPEQDSQIVIGNFMFTVLEASNTKIDM
VSLQISDND
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
gtggaaacgtccatcattgtaattgttgcaacacttttattgtccgcttttttttctgga
atggaaatagcgtttatttctgcgaataagattcatatagaaatagagaaaaaacaggaa
ggtattctagccaaagttctcactaggctcactcggaaaccatccaagtttatcgcttcc
atgcttataggcaataacattgccttggtggtctatggattttatatgggggatctcctc
atgcagtggtttcaagggttgtatccgtcgccatatggcttggtcaatattatgttgacc
gattttagtttagtggcacaaactattatttctaccttggtcattctttttacggcagag
tttttacccaaagtgcttttccagatctattccaatacccttcttaagttattggcagtc
ccagcctatcttttttacatacttttctctgttatttctgaatttgttatttgggtgtcc
gattttattttgaaggcattctttaaaacagatggggatgaagtgcaattggctttcagt
aaaattgagctcggagattacatcacggagcaaatggaaactgtggaagaagaagatgag
gtggattctgaaattcagatctttcagaatgccctggagttttctgcggtaaaagcaagg
gaggtaatgatacctcggaccgagatcacggcggtagaattacatgaaaaaccaaaaaat
ttagtcaagctatttacggagacagggttttcgaaaattcttatatacaaggatactgtg
gacaatatcattggatatgtacattcctatgagctttttaaaaagccaaagaccattaaa
agtgtgctgctgcctgttgaatttgtccctgagaccatgatgatcagtgacatcctaaac
gtccttattaaaaaacgaaagagtattgctgttgttttggatgaatatgggggtacctcg
ggtatcatgactgtggaggatatcgtggaggagctttttggggagattgaggatgaacac
gattctacagatctgcttgaagaaaaaattgacgaaaacaattataaattttctgctagg
ttagaggtggactatatcaatgaaaattataagttgaacctacctgagagtgacgagtat
gagaccctgggagggcttattgtcaatgagaccggagaaattccagagcaagattctcaa
attgtaatagggaattttatgtttacggtgttggaagcttccaataccaagatcgatatg
gtaagtcttcaaatttcagataacgattaa
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