Sediminicola sp. YIK13: SB49_10290
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Entry
SB49_10290 CDS
T04145
Name
(GenBank) crossover junction endodeoxyribonuclease RuvC
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
syi
Sediminicola sp. YIK13
Pathway
syi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
syi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SB49_10290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syi03400
]
SB49_10290
Enzymes [BR:
syi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
SB49_10290
DNA repair and recombination proteins [BR:
syi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SB49_10290
RecFOR pathway proteins
SB49_10290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
Motif
Other DBs
NCBI-ProteinID:
ALM08150
UniProt:
A0A0S1SCK2
LinkDB
All DBs
Position
complement(2323316..2323870)
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AA seq
184 aa
AA seq
DB search
MANEKIILGIDPGTTIMGFGLIKVVNKKMEFLQMNELLLQKYDDPYIKLKLIFERTIELI
DTYHPDEIAIEAPFFGKNVQSMLKLGRAQGVAMAAGLSRQIPITEYLPKKIKMAITGNGN
ASKEQVARMLQSTLGLKSLPKNLDSTDGLAAAVCHFYNEGRIEIGKSYSGWDAFVKQNEK
RVKK
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
ttggcgaacgagaaaattatattgggaatagaccctgggaccaccattatgggttttggc
ctgatcaaggtggtgaacaagaaaatggagtttttgcagatgaacgaactgttgcttcaa
aagtatgacgacccctacattaaactaaaactaatttttgaacgcaccatagaactcatc
gatacgtaccatcccgatgaaattgccatcgaggcacccttttttggtaaaaacgtacaa
tccatgctcaaattgggaagggcccagggagtggccatggcagccggactttccagacag
attcccatcacagaatacctccccaaaaaaattaaaatggcaatcaccggaaacgggaac
gccagtaaggagcaagttgcccggatgctgcaaagtaccttggggttgaaatccctcccg
aaaaatttagatagtacggacggcctcgctgctgccgtatgccatttctataatgaggga
agaatagagattgggaaaagttattcggggtgggatgcttttgtaaaacaaaacgagaaa
cgggttaaaaaataa
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