Sediminicola sp. YIK13: SB49_10390
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Entry
SB49_10390 CDS
T04145
Name
(GenBank) 2-hydroxyacid dehydrogenase
KO
K00058
D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:
1.1.1.95
1.1.1.399
]
Organism
syi
Sediminicola sp. YIK13
Pathway
syi00260
Glycine, serine and threonine metabolism
syi00270
Cysteine and methionine metabolism
syi00680
Methane metabolism
syi01100
Metabolic pathways
syi01110
Biosynthesis of secondary metabolites
syi01120
Microbial metabolism in diverse environments
syi01200
Carbon metabolism
syi01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
syi00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
SB49_10390
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SB49_10390
00270 Cysteine and methionine metabolism
SB49_10390
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
syi04147
]
SB49_10390
Enzymes [BR:
syi01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.95 phosphoglycerate dehydrogenase
SB49_10390
1.1.1.399 2-oxoglutarate reductase
SB49_10390
Exosome [BR:
syi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
SB49_10390
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Gene cluster
GFIT
Motif
Pfam:
2-Hacid_dh_C
2-Hacid_dh
KARI_N
F420_oxidored
NAD_binding_2
AdoHcyase_NAD
ELFV_dehydrog
3HCDH_N
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
ALM08169
UniProt:
A0A0S1SC80
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Position
2344949..2345884
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AA seq
311 aa
AA seq
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MKVLHLDSNHEILAKGLEELGYSNETDYTSSKEEIEAKISSYDGIIIRSRFTIDQTFLDK
ATNLKFIGRVGAGLENIDVEYAKHKEIYLASAPEGNKNAVGEHTLGMLLALFNKLNKADL
EVRKGIWDREGNRGVELDGKTVGIVGYGNMGKAFAKKLSGFDVEVICYDILGGVGDKNAR
QVGIMELRQRADIISLHTPQTPLTMGMINSEFINGFYKPIWFLNTARGKSVVTQDLVAAL
KSGKILGAGLDVLEYEKSSFEQLFTKDMPAAFEYLIKAENVLLSPHVAGWTVESKEKLAQ
TIVDKIKKQFS
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttctccatttagatagcaaccacgagattttggcgaaaggcctagaagaatta
gggtactcaaacgaaaccgactacacctccagcaaggaggagatagaggcaaaaataagt
tcctatgatggcattatcataaggagtaggtttaccattgaccaaacctttttagataag
gccaccaatttaaaatttataggtcgcgttggagcaggcttggaaaatatagatgtggaa
tatgccaaacataaagagatctatcttgcctccgcccccgagggaaataagaatgctgtt
ggcgaacataccttgggtatgctgttggcgcttttcaacaaattaaataaggccgatttg
gaagtccgtaaaggcatttgggacagggagggtaaccgaggtgttgaattggatggtaaa
actgtgggcatcgttggttatggaaatatgggaaaggcttttgccaaaaaactctctggc
tttgatgtggaggtcatctgttacgatattctaggaggcgtgggagataaaaatgccagg
caggtggggattatggaactgcgtcagcgagctgatataataagtttgcatacgcctcaa
acaccattgaccatgggcatgatcaactcggagtttatcaatgggttctataagcctatt
tggtttttgaatacggccaggggtaaaagtgtcgttacacaagatttggtcgctgcactc
aaatccggaaaaatactaggagcaggtctagatgtccttgaatatgagaaatcgtccttt
gaacagctctttaccaaggatatgccggcagcctttgaataccttatcaaggccgaaaat
gttttgctgagcccccatgttgctggttggacagtagaaagcaaggaaaaactggctcaa
accatagtagataagataaagaaacaatttagctag
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