Sediminicola sp. YIK13: SB49_11330
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Entry
SB49_11330 CDS
T04145
Name
(GenBank) CMP deaminase
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
syi
Sediminicola sp. YIK13
Pathway
syi00240
Pyrimidine metabolism
syi01100
Metabolic pathways
syi01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
syi00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
SB49_11330
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
syi02044
]
SB49_11330
Enzymes [BR:
syi01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
SB49_11330
Secretion system [BR:
syi02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
SB49_11330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
SNAD4
APOBEC_N
APOBEC2
NAD1
Bd3614-deam
APOBEC4_like
APOBEC3
APOBEC4
NAD2
APOBEC1
DnaJ_CXXCXGXG
APOBEC_C
Motif
Other DBs
NCBI-ProteinID:
ALM08330
UniProt:
A0A0S1S6N8
LinkDB
All DBs
Position
complement(2537787..2538224)
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AA seq
145 aa
AA seq
DB search
MENKKQRKYDTAYLRMAREWGKLSYCKRKQVGAIIVKDRMIISDGYNGTPTGFENSCEDG
EGYTKWYVLHAEANAISKVASSTQSCEGSTLYITLSPCKECSKLIHQSGIKRVVYQRAYK
DDSGLQFLEKAGVEITYMPIEEFSS
NT seq
438 nt
NT seq
+upstream
nt +downstream
nt
atggagaacaagaaacaaagaaaatacgataccgcttatttgaggatggcaagagaatgg
ggcaaattgtcttattgcaagcgcaagcaggtaggtgccattatcgtaaaggacaggatg
ataatatccgatggttacaacggaactcccaccggcttcgagaatagctgcgaggacggt
gaagggtataccaaatggtatgtgctccacgcagaagccaatgccatttcaaaagtggcg
tcctctactcaatcctgtgagggttctactttatatatcaccctttcaccttgtaaggaa
tgtagtaagctgatccatcaatctggcataaaacgtgtggtatatcagcgagcgtacaaa
gatgattcgggattgcaatttttagagaaggccggggtggaaatcacttatatgcctatt
gaggaattcagttcataa
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