Sediminicola sp. YIK13: SB49_11395
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Entry
SB49_11395 CDS
T04145
Name
(GenBank) glycosyl hydrolase
Organism
syi
Sediminicola sp. YIK13
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sortilin-Vps10
BNR
BNR_2
Beta-prop_KIB1-4
DUF1351
PsbQ
ArAE_1_C
Spectrin_Anc-1
DUF4822
Motif
Other DBs
NCBI-ProteinID:
ALM08343
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Position
complement(2552293..2555427)
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AA seq
1044 aa
AA seq
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MKSFLLKIGMIMLVVFLLPFNTNAQKKKNSSSSDTQYPEELYSSLEYRLIGPFRGGRSAA
VTGVPGEPNLFYFGAAGGGVWKTENGGREWENISDGFFGGSIGAIEVAKSDPNVIYVGGG
EKTLRGNVSSGYGIWKSEDAGKTWASAGLKDSRHVPRIRIHPTNADVVYAAVLGNIYKPT
QERGIYKSTDGGKTWIKKLFVNDQAGAVDLTFDPNNPRILYASTWRAQRTPYSLSSGGEG
SALWKSTDSGETWKEISKNEGFPKDTLGIIGVTVSPKNSERVWAIVENKEKGGLYRSDDG
GNKWTQVNDERKLRQRAWYYTRLYADTEDEDIVYVLNVNYHKSSDGGKTFSTFNAPHGDH
HDLWIAPEDSNRMIIGDDGGAQISYDAGETWSTYYNQPTAQFYRVTTDNSFPYRIYVAQQ
DNSTIRINHRSDGSSINENDWEETAGGESAHIAVDPTNNDIVYGGSYDGFLTRVNHETGT
VRGINVWPDNPMGHGAEGMKYRFQWNFPIIFSKHNPKKLYTFSNHVHVTENEGQSWTLLS
GDLTRNDPTKLVSSGGPITQDNTSVEYYCTIFAANESPLKEGLLWVGSDDGLIHVSKDGG
QNWENVTPSGMPEWSMVNSIEPSAFDEGTCYVAATRYKLGDFQPYLYKTTDYGKTWTKIT
NGIANEHFTRVVREDPKRKGLLYAGTETGMYVSFNDGANWKPFQLNLPIVPITDLTIKDN
NLIVATQGRSLWIIDDLSVLHQLNEAKKNTNTILYKPKDSYRTKGRAARTPSKTSGMNHP
NGVITHFYLKDIKDEDKIALTFTTMAGDTLKSYNTSAKEKDNKLTVKKGGNTFVWDTQGK
GAEKLDGMILWWANLEGAKAVPGNYKVHLNVNGTNTSETFTILPDPRAEVGVADMQKQFD
FVEDVNATVDRAHQSIKKIRKISTQLDAFTKQYKDNEATKDLVEKAKKMKADFESIEKAL
YQTQNRSGQDPLNFPIRLTNKLGHLNSLVTMDDFPPTDQDIVVKNELTAEINKELETFDT
LVDTEIKAFNEAFNNLKLNYLFLE
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctttccttttgaagattggcatgatcatgctggtcgtctttctattgcctttc
aacacaaacgcacaaaaaaagaagaattcctcaagttcggatacccagtatccagaagaa
ctgtattccagtttggagtatcgattgataggtccgttccgcggcggacgttccgcagcc
gtaaccggtgttccgggagaaccaaacttattttattttggcgctgccggtggtggtgtc
tggaaaactgaaaatggtggccgagaatgggagaatatttccgatggcttttttggagga
agtatcggtgctattgaagtagcaaagagcgaccccaatgtcatctacgttggaggaggt
gaaaaaaccttgagaggaaatgtttcttcgggatatggaatatggaaatctgaagatgca
gggaaaacatgggcttccgccggattaaaggacagcaggcatgtgcccagaatacgaatc
catcctaccaatgccgatgtggtatacgcagcagttttggggaatatatataaaccaacc
caagaaagaggtatttataaaagtaccgacggaggaaaaacttggatcaaaaaactattt
gtaaacgatcaggcaggagcagtagatctaacttttgatcccaataacccaagaatacta
tatgcctccacatggcgcgcccaaaggaccccttacagcctcagcagtgggggagaaggc
tctgccctttggaaaagcaccgatagtggggaaacgtggaaagaaatttctaaaaacgaa
gggtttccaaaggataccttagggattatcggggttaccgtttcccctaaaaacagtgag
cgcgtttgggccatagttgagaacaaggaaaaaggaggactttaccgcagtgatgacggg
ggtaacaaatggacccaagttaatgatgaacgtaaattacgtcagagagcatggtactat
accagactttatgccgataccgaagatgaagatatcgtttatgtcctgaacgttaattac
cataaatcttcggatggaggtaaaacctttagcaccttcaatgcccctcatggggatcac
catgatctttggatcgctccggaagattccaatagaatgatcatcggagatgacggaggg
gcccagatatcttatgatgccggggaaacttggagcacctattacaaccaacctacggcc
cagttttatagggtgacaacggacaattcgttcccgtaccgtatttatgtggcacaacaa
gataattccaccatccgaattaaccacagaagcgatggttccagtataaatgaaaatgac
tgggaagagaccgcaggaggggaatcggcccatattgcagtggatcctacaaacaatgat
atcgtttatgggggtagttatgacggattcttgacccgtgtgaaccatgagacaggaacc
gtgagaggaatcaatgtatggccagataaccctatgggtcatggtgcagaaggtatgaaa
taccgctttcagtggaatttccccattatcttcagcaagcataaccctaagaaactatat
acgttttccaatcatgtacatgtaacagaaaatgaagggcagagctggacattattaagt
ggggatctaactaggaacgatcctacaaaattagtttccagtgggggacctataacccaa
gataatactagtgtagaatactactgcaccatttttgctgcaaacgaaagccctttgaaa
gaaggattactttgggtggggagtgatgatggcctaattcatgtttccaaggacggcgga
cagaattgggaaaatgtgaccccgtcagggatgccagaatggtccatggtgaacagtatt
gagccatctgcttttgatgaaggcacgtgttatgttgctgccacccgctataaattggga
gattttcaaccctatttgtacaaaacgaccgattatggcaaaacatggacaaaaatcacc
aatgggatcgctaacgagcattttaccagagtggtaagggaagatcccaaacgtaaaggt
ttgctttacgcaggtacagaaacaggaatgtatgtctctttcaatgatggggccaattgg
aaacccttccaattgaacctgcctatcgtccctattacagatttgaccataaaagacaac
aaccttattgtggctacccaagggcgaagcctttggatcatagatgacctatctgttctc
caccagttgaacgaagcaaagaagaatacaaatacaattttatacaaacctaaagattcc
tataggaccaaaggaagagcggccagaacaccatcaaagacttctgggatgaaccatccg
aatggtgtcatcacgcatttttatctaaaggatattaaagacgaggataaaattgcattg
accttcaccactatggcaggagataccttgaaatcttacaacaccagtgccaaggaaaag
gacaataaactgaccgtaaaaaagggtggaaacacctttgtatgggacacccagggaaaa
ggtgcagaaaaattggacggaatgatcctttggtgggcaaatctggaaggtgccaaggca
gtaccagggaattataaggtacatttaaatgtcaatgggacaaatacatcagagaccttt
accattttacctgatcctagggctgaggttggcgtggcagacatgcaaaagcaatttgat
tttgtggaagatgtaaatgccactgtggacagggcgcaccaatctattaaaaagatccgt
aagatcagtacacaattggatgcctttaccaagcagtataaggataatgaagctaccaag
gacttggtcgaaaaggccaaaaagatgaaagctgattttgagagcatagaaaaggccctg
taccaaacccaaaacagaagcggtcaggatccccttaactttccaatcaggcttaccaat
aaattgggccatttgaacagtctggtgaccatggacgattttccaccaactgaccaggat
attgttgttaaaaatgagctgacagctgagataaacaaagaattggagacatttgacacc
cttgtggatactgagatcaaagccttcaacgaagcctttaataatttaaagctcaattat
ttgtttttagaataa
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