Sediminicola sp. YIK13: SB49_11640
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Entry
SB49_11640 CDS
T04145
Name
(GenBank) endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
syi
Sediminicola sp. YIK13
Brite
KEGG Orthology (KO) [BR:
syi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syi03400
]
SB49_11640
DNA repair and recombination proteins [BR:
syi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
SB49_11640
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Gene cluster
GFIT
Motif
Pfam:
Vsr
DUF559
MTES_1575
DUF5891
Motif
Other DBs
NCBI-ProteinID:
ALM08388
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Position
2610513..2610992
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AA seq
159 aa
AA seq
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MSKIYDEERIIVPRFNEASGFYTTPERSKMMAKIRGKNTKPELQFRKALWAAGFRYRVDY
KKLIGKPDIVLKKYKTVIFIDGEFWHGYNWEERKYKIKTNREFWIPKIERNLQRDREVNI
ALETMGYTVFRFWEKEIKKELDGCLGRVISHLKSIDRGY
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagatatatgatgaagaacgaattatagttcctcgtttcaacgaggcatccggt
ttttacaccactcccgaacgctctaaaatgatggccaagattcggggcaaaaataccaag
cccgaactacaatttagaaaggccctttgggctgccggattcagataccgggtagattac
aaaaaactcataggcaagccggatattgtgcttaaaaaatacaaaactgtcatctttata
gacggggaattctggcatggttacaattgggaagagcgaaagtataaaatcaagaccaat
agggagttttggattccaaaaatagaacgcaacctacagcgggatagggaagtaaatatc
gctttggaaaccatgggctatacagtctttaggttctgggaaaaggaaattaaaaaagaa
ttggatggatgcctaggacgagtcatctcacatctgaaatccatagatcgcggatactaa
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