Sediminicola sp. YIK13: SB49_12560
Help
Entry
SB49_12560 CDS
T04145
Name
(GenBank) 16S rRNA methyltransferase
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
syi
Sediminicola sp. YIK13
Brite
KEGG Orthology (KO) [BR:
syi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
syi03009
]
SB49_12560
Enzymes [BR:
syi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
SB49_12560
Ribosome biogenesis [BR:
syi03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
SB49_12560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
Motif
Other DBs
NCBI-ProteinID:
ALM08545
UniProt:
A0A0S1SDC1
LinkDB
All DBs
Position
2821233..2821904
Genome browser
AA seq
223 aa
AA seq
DB search
MGKLFIVPTPIGNLEDITLRALRILKEVDLILAEDTRTSGKLLHHYSIGTPMQSHHMHNE
HKTVDALVKRMQAGASMALISDAGTPAISDPGFLLTRACVENGIEVDCLPGATAFVPALV
NSGLPNDKFVFEGFLPVKKGRQTRLLLLAEETRTIIFYESPHKLIKTLTNIVEYFGAERP
VSVSRELTKMYEETVRGTATEVLAHYTNKSPKGEIVIVVGGKN
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaattatttatagttcctacgccaattggcaatttggaagacattacacttaga
gcgttgagaatccttaaagaggtagatttaatcttggccgaggacaccagaaccagtggc
aaattactacatcactattccatagggactccaatgcagagccatcacatgcacaatgag
cacaaaacggtagatgccctggtaaaaaggatgcaagcaggggcatccatggcccttatt
tccgatgccgggaccccggccatctcggatcctggatttcttttgacaagggcctgtgtg
gaaaatgggattgaggtagattgccttcctggggccacagcctttgttcctgcattggta
aacagtggccttcccaatgataaatttgtctttgagggctttctgccagtgaaaaaagga
agacagacccgcttattattgttggcagaagaaaccaggaccatcatcttttatgagtca
ccccataaattgatcaaaaccctgacgaatattgtggaatattttggagcggagaggcct
gtatcggtttccagggagcttacaaaaatgtatgaagaaaccgtcaggggaacagcaaca
gaagttttggcccattataccaacaagtccccaaagggagagattgtaatcgtggtcgga
gggaaaaattag
DBGET
integrated database retrieval system
