Sediminicola sp. YIK13: SB49_12780
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Entry
SB49_12780 CDS
T04145
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
syi
Sediminicola sp. YIK13
Brite
KEGG Orthology (KO) [BR:
syi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
syi02000
]
SB49_12780
Transporters [BR:
syi02000
]
Other transporters
Pores ion channels [TC:
1
]
SB49_12780
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
CarbopepD_reg_2
CarboxypepD_reg
SdrD_B
EMC7_beta-sandw
SpaA
Motif
Other DBs
NCBI-ProteinID:
ALM09305
UniProt:
A0A0S1SFH0
LinkDB
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Position
complement(2861584..2863965)
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AA seq
793 aa
AA seq
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MALLLSSISSISQDCNYTLSGSVKDLHDGSLLAGATLILAGTEQAVLSDLDGNYMFTGLC
EGTYAIQVSHPYCLSKGFTIKVNGDTKSNFLLEHHLEELNEVILEGEAYRNQTKTLFESK
ISNAQLEDFSNGTLGDALNSISGVSSLNTGNTVVKPMINGLHSSRIVIVNNGVRMEDQEW
GAEHGPNVDVNSAGSLTLIKGAGALRYGGDAVGGVIVAEAPKVAKKDTLFGKTLWSASSN
GRGSSVSSQLTKSYKSGWYGSLQGTIKRYGDFETPDYVLSNTGAFERNASLRFGLNGLEY
GIEGYYSLFKNDIGILRASHLGGAQDQVRAISSNRPLIIRDFTYNIGNPRQEVTHHLARL
KIFQRIDGLGKLSLQYDFQRNSRQEFDIRRGDDADKASLDLELDTHTLMLDLDGDLFDTG
SIKLGAMARYQSNFADPTTGVRRLIPDYDKYDLGVYAIADYRVKEKLVLEAGVRFDYSYM
DVFKFYRTSLWEARNYDQLFPEIVVEELGNQILTNPQLDFYNTSATAGATYSFNEQYNLF
FNYSLASRPPNPSELFSEGLHHSASRIELGDLRFGSEISNKLALTFQRKNTTFGFSVNPY
INTIRDFMVIEPTDVQQTVRGNFQVWEYRQTKAQLLGVDVDASWAFAKNFRFNHQFSMVK
GYDRNRNEALINMPPVTTQNGVVYQNKNLRNLKLAIQSEYMFRQNEFPDNNFEVFVPETQ
TLETVDVSTPPEAYHLLKFSSSIDLYKVDKSKLTIGVTVSNLLDTSYRNYLNRLRYYADD
LGRNFLLNLKFNY
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
ttggcattgctattgagcagtatctcttctatttcacaagattgtaactataccctttct
ggatctgtcaaagatttgcatgatggttcccttttagcgggtgccacgcttattcttgcg
ggcacagaacaagcggtactatccgatctggacggtaactatatgttcaccggcctttgt
gagggtacctatgccattcaggtttcccatccctactgcctatccaaggggtttaccata
aaagtaaacggcgataccaagagtaatttccttttagaacaccatttggaggagctcaat
gaagtgatcctagaaggagaagcctataggaaccagaccaagaccctttttgaaagcaag
atatccaatgcccagttggaagatttcagtaatggtacccttggtgatgcattaaacagc
attagtggagtctcttccctaaatacaggcaataccgtggtaaagcccatgatcaatggc
ctgcatagcagccggatagtcatcgtcaacaacggtgtgcgtatggaagatcaggaatgg
ggtgcggaacacggaccaaatgttgatgtcaattccgcaggcagccttaccctgatcaaa
ggggcgggagcgcttcggtatgggggtgatgccgtagggggtgttatcgtagccgaagcc
cccaaagtggccaaaaaggacaccctatttggtaaaacgctctggagtgcctcatctaac
ggtaggggctcttcggtatcttcccaacttacaaaaagctacaagagtggttggtacggt
tcccttcaggggaccataaagcggtatggcgattttgaaaccccagattacgtactcagt
aatacgggtgcttttgagcgcaacgcttctttacgctttggcctaaacggcctggaatat
gggattgaaggctactattcactttttaaaaatgatattggcatcttacgggcgtcccat
ctagggggcgcacaagatcaggtccgtgcaatcagcagcaacaggccactgattatcagg
gatttcacctacaacataggaaacccaagacaggaagtaacccatcatttggcacggtta
aaaatattccaacgtattgatggtcttggcaaacttagccttcagtatgattttcagcgc
aacagccgtcaagaattcgatatccgtcgtggtgacgatgcagataaggcctccctggac
cttgaactagacacccataccctgatgctggacttggacggagacctttttgataccggc
tctataaaactaggtgccatggcacgataccagagtaattttgctgacccaactaccggg
gtaagacgtttaatacccgattacgacaaatatgatctaggggtttatgccattgccgat
tacagggttaaagaaaagctggttttggaggctggggtgcgttttgactatagctatatg
gacgtgtttaaattttacaggacctctttgtgggaagcgcgcaactatgatcagctgttc
cctgagatcgtggtagaggagctcggcaaccagatactcaccaatccacaattggatttt
tacaatacctctgccactgccggggccacgtactcctttaacgagcaatacaacctattt
tttaattattccttggcttcacgcccacccaacccttcagaactttttagtgagggactg
catcattccgcttcccgaatagagttgggcgatttgcgctttggatccgaaatatccaat
aaactggccctgaccttccagcggaaaaataccacctttggtttttctgtgaatccgtat
atcaataccataagagattttatggttatagagcctacagacgtacaacaaacggtaagg
ggtaattttcaggtctgggaataccgccagaccaaggcgcaactcttgggtgtagatgtg
gatgcctcctgggcctttgcaaagaattttcgtttcaaccaccagttctctatggtaaag
gggtatgaccgtaaccgcaacgaggccttgatcaatatgcctcccgtgactacacaaaac
ggtgtggtctatcaaaataaaaatttgcgcaatttaaaattggccatacagagtgaatat
atgtttcgccagaacgaatttccggacaataattttgaggtctttgtcccagaaacacaa
accttggagaccgtagatgtgagcaccccaccagaggcctatcatctgctaaaattcagt
tctagtattgatctatataaggtcgataaatctaaacttacaataggggtcaccgtatcc
aaccttttggatacctcctaccggaattacctgaaccgactgcgctattacgccgacgat
ttgggcagaaactttttgttaaaccttaaattcaattattaa
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