Sediminicola sp. YIK13: SB49_12815
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Entry
SB49_12815 CDS
T04145
Name
(GenBank) cell envelope biogenesis protein OmpA
KO
K03286
OmpA-OmpF porin, OOP family
Organism
syi
Sediminicola sp. YIK13
Brite
KEGG Orthology (KO) [BR:
syi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
syi02000
]
SB49_12815
Transporters [BR:
syi02000
]
Other transporters
Pores ion channels [TC:
1
]
SB49_12815
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OmpA
TSP_3
DUF3502
Motif
Other DBs
NCBI-ProteinID:
ALM08583
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Position
complement(2874682..2876022)
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AA seq
446 aa
AA seq
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MKHLSKLLVVALLAVGLNNLHAQDENNPWQVSFGVNAIDVYPTGDVSSFGNEYFNVNDHW
NILPSISYVSVSKYVGDGFSIGVRGSLNRISKLGDVSVDDLSHYAADGTIKYAFLKNTKL
DPFVEIGGGYTWVNEIGAGTVNGGVGVNYWFSDNIGLTVQTSYKHAFEDYGVKHFQHLAG
IAIKFGGTDTDGDGIYDKDDACPEVAGLAIFNGCPDTDGDGIEDSKDECPNEAGSKEMNG
CPDADGDGVADKDDACPNEAGLPALAGCPDADGDGIADKDDACPSEAGPAENKGCPWPDT
DGDGVLDKDDACPEVAGTVANKGCPEVTEEVQKQLNDYARTILFDTGKSSIKAESTAVMV
DIILILKEYPTAKFTVEGHTDSVGSASLNQKLSESRANSVRDFLIKEGIGADRLTAIGYG
EDKPIATNNTRAGRTQNRRVEINLIK
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaaacatcttagcaaattattagttgtggccctacttgctgtaggattaaacaactta
cacgcgcaggacgaaaacaacccatggcaggttagttttggtgttaacgcgattgacgtt
tatccaactggtgatgtaagctcatttggaaacgaatattttaatgtaaacgaccactgg
aacattcttccatctatttcctacgtttctgtatccaaatatgttggtgacggattttca
attggagttagaggttcattgaacagaatttccaaattaggtgatgttagtgtagatgat
ctttctcactacgcagctgacggtactataaaatatgcctttttgaaaaacactaagcta
gaccctttcgttgaaatcggtggtggttatacttgggttaacgaaattggtgctggtact
gttaacggaggtgtaggtgttaactactggttttccgataatatcggtctaactgtacag
acatcttacaagcacgctttcgaagattacggagtaaaacatttccaacacttagcaggt
atcgccattaaatttggtggaactgatactgacggtgacggaatctatgataaagacgac
gcctgtcctgaggtagctggtcttgcaattttcaacggatgtcctgatactgacggtgac
ggaatcgaagatagcaaagatgagtgtcctaacgaagctggttctaaagaaatgaacggt
tgtcctgatgctgacggtgacggtgttgctgataaagatgacgcttgtcctaacgaagct
ggtcttcctgctttagctggttgtcctgatgctgacggtgacggtattgctgataaagat
gatgcttgtcctagcgaagctggtcctgctgaaaacaaaggttgtccttggcctgatact
gacggagacggagtattggataaagatgatgcttgtcctgaagtagctggaactgttgct
aacaaaggttgtcctgaagtaactgaagaagttcagaaacaattgaacgactacgcaaga
actatcttgttcgacactggaaaatcttctatcaaagctgaatctactgctgtaatggta
gatatcatcttgatcttgaaagaatatccaacagctaagtttactgttgaaggtcacact
gacagtgttggtagtgcatctttgaaccaaaagctttctgaatccagagcaaactctgta
agagatttcttgatcaaagaaggaattggagctgacaggttaacggctatcggatatggt
gaagacaagccaattgctaccaacaatacaagagctggtagaactcaaaacagaagagtt
gaaattaacttgatcaagtaa
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