Sediminicola sp. YIK13: SB49_12825
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Entry
SB49_12825 CDS
T04145
Name
(GenBank) ATP-dependent helicase
Organism
syi
Sediminicola sp. YIK13
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Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
L_protein_N
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
ALM08585
UniProt:
A0A0S1SDG0
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Position
complement(2877343..2880462)
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AA seq
1039 aa
AA seq
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MQNANYKIYNASAGSGKTFTLTKEYLKIILASTSNRSFRQILAITFTNKAVNEMKQRILG
SLFEFGETNSLKDASPMFLTISEELQMSAEDLQKKAKKTLKEILHNYAFFDVSTIDKFTH
RLIRTFAKDLKLPQNFEVILDTALLLDEAIARLINKAGTNEKLTSVLLDFALEKANEDKS
WDISLDLAKIGKLLFDENHADHLKQIADKEIGDFLVLKKKIQSNIAKNEEGLFSTAKEIL
EIINNNGLEFSDFKSGYFPKFIAKIADKNYVMDFKAGWKQNFASDPLYTKACPDATKAVL
DSLHPQFTQLFHNIKEKAVELLFLKNAYGNIVPLTVLNAIQQEVKALELERDQLPITSFN
RIISKEIKNQPAPFIYERLGEKYRHYFIDEFQDTSEMQWNNLIPLIGNALESEDLLGQKG
SLLLVGDAKQAIYRWRGGKAEQFSNLINLEKNPFVLSPDTKNLPANYRSCEEVIKFNNDF
FTIASPFLNNVAYNQLFLEGNKQEYNSKKGGLVTIGFVEESEDMTEDEHYCAQILNSIEE
VRKKNFGLKDICILTRSRKHGIIVADFLMKEGIPIISSETLLLNSSPKVQFLIALLHYSI
DPNNKETAFDILYFLSGDKGTDHNFIASHLEGVGALLKDKYEFDTKYLKQHSVYDGLEHA
IKQFNLIEGSDAYITYLMDTVLEVEQKEGSSPHSFLTYWEKKKGKLSITAPESVNAIQIM
TVHKSKGLEFPIVIFPYANEQLYKEIDAKLWIPVDADSFNGFEALLVNKKQEVVAYGETA
SVLYEEEQHKLELDAFNVLYVALTRAVDALYILTKKDLKSNGDHKTDFYSGLFIHYLKEK
GHWDLSKQTYVFGALEFAEKHQKEMMDQLSVPYALTYKDRPSFNLITTSGSLWDSGAELA
MEQGNVLHQLLSYIKTEADIGQALTLMQRNGQITHQETNSLKEVLLKIVRHPELEEFFHS
DTIVWNERDIITQIGLILRPDRIVLQEKAATIIDYKTGTRSSAHHTQVNDYASAMEAMNY
TVKNKIIVYINDTITPEFI
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
gtgcagaacgccaactacaaaatatataatgcctctgccggttcgggcaagacctttacc
ctaaccaaggagtatcttaaaattattcttgcttccacttccaaccgtagttttcggcaa
atactagccattacctttacgaacaaggccgtgaatgaaatgaaacaacgcatcttgggc
agtctgttcgaatttggggagaccaattctttaaaagacgcatctcccatgttccttacc
atttcggaagagctgcagatgagcgctgaagaccttcaaaaaaaggcaaaaaaaacgcta
aaagagattttgcacaattatgctttttttgatgtgtctaccatagataaatttacgcat
cgtcttattcgcacctttgcaaaggacttaaagctaccgcaaaattttgaggtgattctg
gacaccgcccttcttttggatgaggccatagcccgactcatcaacaaggcggggacaaat
gaaaaactcacctcagtattgttggattttgccctggaaaaagccaatgaggacaagagt
tgggatataagtctggatttggccaaaattgggaagttgctatttgatgaaaatcatgct
gaccacctgaagcagattgcagataaggaaataggtgattttttggtcttgaagaaaaaa
atccagtccaatatcgccaagaatgaagagggattgttttctaccgcaaaggaaatattg
gaaattatcaataacaacggtttagaattcagcgattttaagtcgggctatttcccaaaa
ttcattgccaaaattgccgacaaaaattacgtgatggactttaaggcaggatggaaacaa
aattttgcaagcgacccgctttatacaaaagcatgtcccgatgctacaaaggctgtttta
gattcgctccacccccaattcactcaactcttccataatatcaaagaaaaggcagtagaa
ttattgttccttaaaaatgcatatggcaacattgttcccctcacagttcttaatgccata
cagcaagaggtgaaagccctggaattggaaagggaccaattgcccatcacttcctttaac
cgcatcatctcgaaagaaattaaaaatcagcctgctccctttatctacgaaaggctgggc
gaaaagtaccggcattatttcattgatgagttccaggacacttcggagatgcagtggaac
aatctcatccccttaataggaaatgccctagagagtgaggatcttcttgggcaaaaaggg
tccttattattagttggtgatgccaagcaggccatttacagatggcgcggtggcaaagca
gaacaattttcaaaccttatcaacctagaaaaaaatccatttgtactttccccggatacc
aaaaatttacctgccaattataggagttgtgaagaggtgatcaaattcaataatgatttc
tttaccattgccagtccctttttaaataatgtagcctacaatcaattgtttcttgagggg
aacaagcaggagtacaattccaaaaagggtggtttggtgacaattggctttgttgaggaa
tcggaggacatgaccgaagatgagcattattgtgcgcagatacttaattccattgaagag
gtaaggaaaaagaattttggccttaaggatatctgcatccttacgcgtagtcgcaaacac
gggattatagtggccgattttctaatgaaagaaggaatccccattatttcctcagaaacc
cttttattgaacagcagcccaaaagttcaatttttaattgccctcctacactattccatt
gaccccaataataaggaaactgcttttgatatactttattttctttctggggacaaaggc
accgatcataattttatagcatcacatttggagggagttggggctctattaaaagataaa
tatgaatttgataccaaatatttaaaacaacactcggtttatgacggtctggaacacgcc
ataaagcaattcaatttaatagaaggttctgatgcctacattacctatttaatggatacg
gtcctggaggtggaacaaaaagaagggagcagcccccattcctttctgacctattgggaa
aagaaaaaaggcaagctaagcataacagctccagaaagtgtgaacgccattcagattatg
accgttcacaagtctaaaggactggaatttcccatagtaatattcccttatgccaatgaa
cagctctataaagaaatagatgcaaaattatggatccctgtagatgcggattcgttcaac
ggttttgaggcgcttttagtgaataagaaacaagaggtggtagcgtatggagaaacggcc
agtgtactctacgaggaagagcagcataaattggaattggacgccttcaatgtcttatat
gttgcactaacaagagctgtagatgcactttatatacttaccaagaaagacctcaaaagc
aacggggatcacaaaacggatttctattctggattgttcatacattatttaaaggaaaag
gggcattgggatctttcaaagcaaacctatgtatttggtgcgctcgaatttgcagagaag
catcaaaaagagatgatggatcagttatccgtcccttatgcgcttacttataaggatagg
ccaagttttaatctcatcaccacctcgggatctctttgggactcaggggcagaacttgcc
atggaacaaggaaatgtattgcatcaattgttgagctatataaaaactgaagccgatatt
gggcaagctctaaccctaatgcagagaaatggccaaattacccatcaagaaaccaactcc
cttaaagaggtccttttaaagattgtccgtcacccagaattggaagaatttttccattcg
gatacaattgtttggaatgaaagggatataattacccaaatcgggttaattttgcgacca
gataggattgtgctacaagaaaaagcagcaacaatcattgattacaaaacaggaacaagg
agttctgcccaccatacgcaggtgaatgattatgcatcggccatggaagccatgaactac
actgtcaaaaataaaattatcgtttatattaatgataccataacaccagaattcatataa
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