KEGG   Sediminicola sp. YIK13: SB49_12865
Entry
SB49_12865        CDS       T04145                                 
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
syi  Sediminicola sp. YIK13
Brite
KEGG Orthology (KO) [BR:syi00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    SB49_12865
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:syi03019]
    SB49_12865
   03009 Ribosome biogenesis [BR:syi03009]
    SB49_12865
   03036 Chromosome and associated proteins [BR:syi03036]
    SB49_12865
Enzymes [BR:syi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     SB49_12865
Messenger RNA biogenesis [BR:syi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     SB49_12865
Ribosome biogenesis [BR:syi03009]
 Eukaryotic type
  90S particles
   RNase
    SB49_12865
 Prokaryotic type
  rRNA processing factors
   SB49_12865
Chromosome and associated proteins [BR:syi03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     SB49_12865
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DSRM_2
Other DBs
NCBI-ProteinID: ALM08593
LinkDB
Position
2887902..2888642
AA seq 246 aa
MNFPSNIFNSHPKEDGDFFGGMTRILGFKPKKLDIYKKAFLHRSANVKDAKGNPMNYERL
EFLGDAMLGTIISRYLYNEVPEGDEGYLTKMRSKIVSREHLNELGKDLNLIDFVESRIPR
SHFGDNIHGNVFEALVGAIYLDRGYKYCEKFINSRVIIPYVDIEQLEGKVISYKSLVIEW
CQKQKKTFNYNVYEDTGKDVLKHFAVKLTIGNNVVAKARATSKKKAEERASKRAYFALQN
KIDKTE
NT seq 741 nt   +upstreamnt  +downstreamnt
atgaattttccttccaatatattcaattcccatcctaaagaggatggggatttttttggg
ggaatgactagaatacttggatttaagcccaagaaattagacatctacaaaaaggcattt
cttcaccgctccgctaacgtaaaagacgccaaggggaaccctatgaactatgagcgacta
gaattcttgggggatgccatgctcggcaccataatatcacgttacctctacaatgaagtt
ccggaaggagacgagggataccttaccaaaatgcgctcaaagattgtaagtagggaacat
ttgaacgagttgggaaaggacctaaaccttattgattttgtggaaagcagaattccaaga
tcccactttggggacaatatccatgggaatgtttttgaggctttggtaggggctatttat
ttggatagagggtataaatactgtgaaaaatttatcaattccagggtgattatcccatat
gtggatatagaacaactggagggtaaggttatcagctataagagcttggtcatagaatgg
tgccaaaaacagaaaaagacctttaattacaacgtatatgaggatacaggcaaggatgtc
ctaaaacattttgctgttaagctcaccatcgggaacaatgttgttgccaaagctagagca
acctctaaaaaaaaggcagaggaaagggcttccaagagggcgtattttgcattacagaac
aaaattgataaaaccgaataa

DBGET integrated database retrieval system