Sediminicola sp. YIK13: SB49_13255
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Entry
SB49_13255 CDS
T04145
Name
(GenBank) glycyl-tRNA synthetease
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
syi
Sediminicola sp. YIK13
Pathway
syi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
syi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SB49_13255
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
syi01007
]
SB49_13255
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
syi03016
]
SB49_13255
03029 Mitochondrial biogenesis [BR:
syi03029
]
SB49_13255
Enzymes [BR:
syi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
SB49_13255
Amino acid related enzymes [BR:
syi01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
SB49_13255
Transfer RNA biogenesis [BR:
syi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SB49_13255
Mitochondrial biogenesis [BR:
syi03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
SB49_13255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
tRNA-synt_2b
Macro_2
Motif
Other DBs
NCBI-ProteinID:
ALM08665
UniProt:
A0A0S1SDP8
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All DBs
Position
2976283..2977824
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AA seq
513 aa
AA seq
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MAKQEDDFKKVISHAKEYGYVFQSSEIYDGLSAVYDYAQNGVELKNNIKEYWWKAMVQMN
ENIVGIDSAILMHPTTWKASGHVDAFNDPLIDNKDSKKRYRADVLIEDHVAKIEAKIDKE
VDKAAKRFGDAFDKEQFLATNPRVVDYQEKASSILKRMGKSLEFEDLADVKNLIEELEIG
CPLSGSKNWTEVKQFNLMFGTKLGASAESAMDLYLRPETAQGIFVNFLNVQKSGRMKIPF
GIAQIGKAFRNEIVARQFIFRQREFEQMELQFFVRPGTQKEWYEQWKETRIKWHNSLGLG
QDNYRFHDHDKLAHYADAAADIEFKFPFGFKELEGIHSRTDFDLSSHEKFSGKKLQYFDP
ELNESYVPYVVETSIGVDRMFLAVFSNSLQEEELENGTTRTVLKIPAVLAPTKAAVLPLV
KKDGLPEIAHEIIDELKWDFKVVYDEKDAVGRRYRRQDAAGTPFCITVDHQTLEDKTVTI
RHRDTMEQQRVAISDLKTIISQEVDMKNWLKKM
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcaagaagacgattttaagaaagttatatcccatgccaaggagtatgggtat
gtttttcaatcaagtgaaatttacgatggactcagtgccgtttatgactatgcccaaaac
ggggtagagttaaaaaacaatataaaagaatattggtggaaggccatggtgcagatgaac
gagaatattgtgggaatagattccgcaatattaatgcacccaactacatggaaggcttca
gggcacgtagatgcctttaacgatccccttatagacaacaaggattccaagaaaagatat
agggcggatgttcttatagaagaccatgttgccaaaattgaggctaaaattgacaaagaa
gtggataaagcggccaaaagatttggcgatgcttttgataaggaacaatttttggccaca
aacccacgagtagtggattatcaggaaaaagcgagttctattttaaaacgcatgggtaaa
tctttggaattcgaggatttggcagatgtgaaaaaccttatagaagaattggagattgga
tgtcccttgtccggttcaaaaaactggacggaggtaaagcaatttaaccttatgttcggc
actaaattaggggcatctgcagaaagtgcaatggacctttacctgcgtccagaaacggcc
caaggaatattcgtcaactttttgaacgttcaaaaaagtggccgtatgaaaattcctttt
ggtattgcccagataggaaaggcctttaggaacgagatcgttgcaagacagtttattttc
cgtcagcgcgagtttgaacaaatggaactgcaattttttgtaagacctgggacacaaaaa
gagtggtacgagcagtggaaagaaactagaatcaagtggcataattccttaggtttggga
caagataattaccgtttccacgatcacgataagttggcacattatgcagatgcggccgcc
gatatagaatttaaattcccattcggatttaaggaattggaaggaattcactccagaacc
gattttgatttaagtagccatgagaaattttcaggtaaaaagcttcagtattttgatcct
gaacttaatgaaagttacgtgccttatgtagtagagacctctattggtgtggacagaatg
ttcttggcagtattctccaattccctgcaggaggaggaattggaaaatggaactacaaga
acggttttgaaaatacctgcagtattggcacctaccaaagctgccgtattgccattggtg
aagaaagatggtcttccagaaatagcccatgagatcattgatgaattgaaatgggacttt
aaggttgtttacgacgaaaaggatgcggttgggcgtcgttacagaaggcaggacgccgct
ggaaccccgttttgcattacggtagatcaccaaactttggaagataaaaccgtaactatt
cgccatagagataccatggaacagcaaagggttgccatttctgacctaaaaacgatcatt
tcccaagaggtggatatgaaaaattggctcaaaaaaatgtaa
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