Sediminicola sp. YIK13: SB49_13280
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Entry
SB49_13280 CDS
T04145
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
syi
Sediminicola sp. YIK13
Brite
KEGG Orthology (KO) [BR:
syi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syi03400
]
SB49_13280
DNA repair and recombination proteins [BR:
syi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SB49_13280
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
DnaB_C
ChlI
Zn_ribbon_LapB
Lon_C
AAA
AAA_24
AAA_22
AAA_5
AAA_16
CobU
NTPase_1
AAA_14
ABC_tran
AAA_18
NACHT
nSTAND3
RsgA_GTPase
DZR
MCM
TniB
Viral_helicase1
Isochorismatase
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
ALM08670
UniProt:
A0A0S1SEG8
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Position
complement(2982708..2984069)
Genome browser
AA seq
453 aa
AA seq
DB search
MAKIKTAFFCQNCGTQYAKWAGQCSGCKEWNTIVEEVVQKEEKSSWKSPTNTAKKVSKPL
RVNEINTEKELRLNTYDLEFNRVLGGGIVPGSLILLGGEPGIGKSTLLLQIALKLPYKTL
YVSGEESQKQIKMRADRIHPNSETCYILTETKTQNIFQQIEATEPDIVVIDSIQTLHSDY
IESAAGSISQIRECTAELIKFAKETNTPVILIGHITKDGTIAGPKILEHMVDTVLQFEGD
RNYVYRILRALKNRFGSTAELGIYEMQGSGLREVNNPSEILISKNDEGLSGTAIASTVEG
MRPLMIEIQALVSTAVYGTPQRSTTGYNAKRLNMLLAVLEKRAGFKLGAKDVFLNITGGI
SVDDPAIDLAVVAAILSSNEDVPIDKGVCFAAEIGLAGEIRPVQRVEQRILEAEKLGFTT
IYVSKNNKITLKNTKINIALVSKIEDIASSLFD
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaataaaaacagcttttttttgtcaaaattgcggtactcaatatgccaaatgg
gcagggcaatgttcagggtgcaaagaatggaataccattgttgaagaggtagttcaaaaa
gaggagaaatcgagttggaaaagccctacaaatacggccaaaaaagtctcaaaacccctt
agggtcaatgaaataaacacggagaaagaactacggttaaacacctatgacctagagttc
aatcgtgttcttgggggcgggattgtccctggctcccttatcctcttaggaggggaacct
ggtatcgggaaaagcacgcttcttcttcagattgccctaaaattgccttataagaccctt
tatgtttcaggagaggaaagccagaaacaaataaagatgcgggccgatcgcatacatccc
aatagcgaaacctgttacatcctaacagagactaagacccagaatatatttcagcaaatc
gaagccacggaacctgatattgtggttatagattccatacagacgcttcattccgattac
attgaatctgccgccggtagtatttcgcaaattagggaatgcaccgctgaactcataaaa
tttgccaaagagacgaatacccccgtaatattaataggccatattaccaaagatggtacc
atagccgggccgaagatattggagcatatggtagataccgttctccaatttgaaggggac
cgcaattacgtataccgaattttgagagcccttaagaacagatttggatctaccgcagaa
ctcggaatttatgaaatgcaaggaagcgggctacgggaagtgaacaacccatcggaaata
ttgatttccaaaaatgatgagggccttagtggcaccgccatagcttccacggtggagggc
atgaggccattaatgatagaaatacaagccttggtcagtacggcggtctatgggacccca
caacgctccacaacaggttacaatgccaagcgtttgaatatgttgttggcggtattggaa
aaacgtgcaggatttaaattaggagctaaagatgtcttcctaaatattactgggggaatc
tcagtggacgatcctgccattgatctcgctgtggtggcagccatactttccagcaatgag
gatgttcctattgacaagggggtgtgttttgctgcggaaataggtttggcaggtgaaatt
agaccagtacaacgggtggaacagcgcatattagaggctgaaaaattgggctttaccact
atttatgtctccaaaaacaataagatcaccttaaaaaacacaaaaattaacattgcgctg
gtttccaaaattgaagatatagcctcaagcttatttgattag
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