Sediminicola sp. YIK13: SB49_13475
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Entry
SB49_13475 CDS
T04145
Name
(GenBank) adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
syi
Sediminicola sp. YIK13
Pathway
syi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
syi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SB49_13475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syi03400
]
SB49_13475
Enzymes [BR:
syi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
SB49_13475
DNA repair and recombination proteins [BR:
syi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SB49_13475
Prokaryotic type
SB49_13475
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
Motif
Other DBs
NCBI-ProteinID:
ALM08705
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All DBs
Position
3022286..3023323
Genome browser
AA seq
345 aa
AA seq
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MSFSQKIIHWYSANKRSLPWRNTTDPYKIWLSEIMLQQTRVAQGMPYYERFIEHFPTVHD
LANASEEEVLKLWQGLGYYSRARNLHATAKLISEKYNGQFPDNYKGLLALKGVGDYTASA
IASFCFKEAQPVVDGNVYRVLSRYFGIDLPINSTEGIKYFKALALKLMDADQIADYNQGI
MEFGALQCAPKNPYCLHCPLNDSCVALQKGKIDVLPVKLKKTKVKERFFNYLVVLDKDYT
IEIRQRRGRGIWQNLYEFPLLETEREYSLEEITNTMDTVLELKETSEIYQFNEKKIVHKL
SHQHLHTKFWIVKSGEKHRNGVSLEELKEYPVPVLIAEFINTFKF
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgtctttttcccaaaaaattattcattggtattcggccaacaaacggagtttaccatgg
agaaacaccacagatccctataagatttggctatcggaaattatgttgcaacagacccgc
gtagcacagggaatgccttattacgagcggtttatagaacattttccaacggttcatgac
ttggccaacgcgtccgaagaagaggtgttgaaactatggcagggacttgggtattattcc
agggcaaggaatttacacgccaccgctaaattaatttcggaaaaatacaacgggcagttt
ccagataactataaagggttgttggcactaaagggggtaggtgactatactgccagcgcc
atagcttctttctgtttcaaagaggcgcaacccgttgttgatggaaatgtttaccgggtc
ctgtcgcgttattttggaatagacctgcctatcaacagcacagagggcatcaaatatttt
aaggctttggccttaaagctgatggatgccgatcaaattgcggactataatcaaggaatc
atggagtttggtgctttgcagtgtgcgccaaagaatccttattgtttgcattgtccctta
aacgatagttgtgtggcattacagaaaggaaaaatagatgtcctcccagtgaaattgaaa
aagaccaaggttaaggaacgttttttcaattaccttgtagtgttggataaggattatact
attgagataaggcaaagaaggggtagggggatatggcaaaacctttatgagtttcctttg
ctggaaacagaaagggaatattcattggaagaaataaccaataccatggatactgttttg
gagttaaaggaaacttctgagatctatcaattcaatgaaaaaaaaattgtacataaactg
tcccaccagcatttgcacactaaattttggatcgtaaaaagtggggagaaacacaggaac
ggggtgagccttgaagagcttaaggaatatcctgtgccagttttgatagcagagtttata
aatacgtttaaattttag
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