Sediminicola sp. YIK13: SB49_13650
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Entry
SB49_13650 CDS
T04145
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
syi
Sediminicola sp. YIK13
Pathway
syi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
syi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SB49_13650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syi03400
]
SB49_13650
Enzymes [BR:
syi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
SB49_13650
DNA repair and recombination proteins [BR:
syi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SB49_13650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
ALM08737
UniProt:
A0A0S1SDT4
LinkDB
All DBs
Position
complement(3055819..3056382)
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AA seq
187 aa
AA seq
DB search
MSKHRCAWCLGDPLYESYHDEEWGVPLRDDDALFEFLILETFQAGLSWITILRKRENFRE
ALDGFNYHKIAQYDPEKIASLMANSGIVRNKLKINATVSNAQAFLKIQQEFGSFSSYIWK
FVDGKPIKNEVKSPKDIPANTELSDRISKDLKKRGFKFVGSTVVYAHMQATGMVNDHEIN
CFRYHEV
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaacatagatgcgcttggtgcctaggtgatcccctctacgaaagctatcatgat
gaggagtggggagttcctttaagagatgatgatgccctgtttgaatttttgattttggaa
acttttcaggccggattgagttggatcacgattttgcggaaacgggaaaatttccgtgaa
gccttagacggattcaattatcataaaattgcacaatatgatccggaaaagattgcttcc
ctgatggcaaattctggtatcgtccgcaataagcttaagatcaatgctaccgtttccaat
gcccaggcatttcttaagattcaacaagaatttggaagcttcagttcgtacatatggaag
tttgttgatggaaagcccattaagaatgaggttaaatcacctaaggacattccggccaat
actgagctttcggataggattagcaaagatttaaaaaaacgtggctttaagtttgtaggt
agtacagttgtttatgcccatatgcaggcaacagggatggttaacgatcatgaaataaat
tgttttagataccatgaagtttag
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