Sediminicola sp. YIK13: SB49_13710
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Entry
SB49_13710 CDS
T04145
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
syi
Sediminicola sp. YIK13
Brite
KEGG Orthology (KO) [BR:
syi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
syi03016
]
SB49_13710
Enzymes [BR:
syi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SB49_13710
Transfer RNA biogenesis [BR:
syi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SB49_13710
Prokaryotic type
SB49_13710
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
SAM_PNT
Motif
Other DBs
NCBI-ProteinID:
ALM08747
LinkDB
All DBs
Position
complement(3066882..3067589)
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AA seq
235 aa
AA seq
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MMTKEDYLEGQILLIDKPLTWTSFQAVNALKWAIRRKFELKKIKIGHAGTLDPLATGLLL
VCTGKFTKRIIELQGQVKEYTGTITLGATTPSYDLETEVDNTYPTEHITEELIHRTTEQF
IGEIQQFPPVFSALKKDGKRLYEYAREGKEVEIQSRSVEIHNFEITKIEMPIITFLVVCS
KGTYIRSLANDFGKALDSGGHLSSLRRTKIGDFNVDNAVTPLDFQDALLPDRLNT
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
ataatgacgaaagaagattacttggaagggcagatattgctgatagacaaaccgctcacc
tggacttcttttcaagcagtaaacgccttaaaatgggctattcgacgcaaatttgagctc
aagaaaataaagattggccacgcggggactttggaccctcttgcaactggactactattg
gtctgtactggaaaatttaccaaaagaattatcgaattacagggacaggtaaaagaatat
acgggtaccattaccttaggtgccacgaccccttcttatgatcttgagaccgaagttgac
aatacctatcccactgagcacatcacggaagaactgattcatcgaaccacagaacagttc
attggcgaaattcaacaattccctcctgtattttccgctctaaaaaaagacggaaaaaga
ttatacgagtatgcaagggaaggaaaagaagtagaaatacaatcgaggagcgttgaaatt
cataactttgaaataaccaaaattgaaatgcccatcattacattcctagtcgtctgtagc
aagggcacctatatcaggtctttggccaatgattttggcaaagcattggattccggagga
catctttcttcattaagaagaaccaaaataggtgatttcaacgtagataatgctgtaaca
cctcttgattttcaggatgcactgcttcctgatcgattgaatacttag
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