Sediminicola sp. YIK13: SB49_14165
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Entry
SB49_14165 CDS
T04145
Name
(GenBank) general secretion pathway protein GspF
KO
K02653
type IV pilus assembly protein PilC
Organism
syi
Sediminicola sp. YIK13
Brite
KEGG Orthology (KO) [BR:
syi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
syi02044
]
SB49_14165
02035 Bacterial motility proteins [BR:
syi02035
]
SB49_14165
Secretion system [BR:
syi02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
SB49_14165
Bacterial motility proteins [BR:
syi02035
]
Pilus system
Pilus assembly proteins
SB49_14165
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Gene cluster
GFIT
Motif
Pfam:
T2SSF
DUF1129
DUF2207_C
Cation_ATPase_C
Motif
Other DBs
NCBI-ProteinID:
ALM08812
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Position
3175890..3177026
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AA seq
378 aa
AA seq
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MGFKLEHTTIGAKKEFSKGMDNTSILQKEINFFGSTFSNKKKEDFYTELSVLLKAGITLK
DGLNLIAENQTKEKQRQFYLEMVDGLVAGTSFSEVIHKKEEFTEYEYYSLKIGEETGTVY
KITEELGKFFARKNEHRRNLINALTYPIIILVTAVLVVVFMLRLVVPMFQDIFKQNNVEL
PGITKFIIGASDFIRDYGWWVLIFLLGLLFFRKLFTKKESFKRKRDYLVLRIPYAGNFVK
AVYLAQFTQAVTLLTSSKVPLLNSIELVGRMIDFYPLKDALSTVEEKIMKGSGLSESLKG
NKIFDNRMISLVKVAEETNQTEFIFERLNQQYNIEVQQKSKLLSTLMEPLIIVFVGILVG
LILVAMYLPMFKLGSVLG
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggggtttaaactagagcatactacaattggagcaaaaaaggaattttctaaagggatg
gacaacacctctattctacaaaaagagattaacttttttggatctacattttcaaataaa
aagaaggaagatttttatacagaattaagtgttcttttaaaggcgggcatcaccctaaag
gatgggctgaacctaattgcagagaaccagaccaaggagaagcaacgccaattttatttg
gagatggtggatggtttagtagcaggaacaagcttttcagaagtaatacataaaaaagaa
gagtttacggaatatgagtactattcccttaaaattggagaggaaacagggacggtgtat
aaaataaccgaggaactagggaaattctttgctagaaagaatgaacacaggagaaacctg
atcaacgctcttacctatcctatcattattttggtaaccgcggtattggtagtcgttttt
atgttgcgattggtggtacccatgttccaagatatatttaaacagaacaatgtagaattg
cctgggatcacaaaatttattattggggcatctgactttattagggattatggttggtgg
gttcttatttttttgttgggcctgctgtttttcagaaagctttttaccaaaaaagaaagc
tttaagagaaaaagggattatctggttttgcgtataccctatgcaggtaattttgtgaaa
gcagtttatctggcacaatttacccaagcggttaccttacttacctcctctaaggtaccg
ttgttgaacagtattgaactggtaggtaggatgatcgatttctaccctttaaaagacgcc
ttatccactgtggaggaaaaaataatgaaaggtagtggtctaagtgaaagcttaaaagga
aataaaatatttgacaataggatgatttccttagtgaaagtggccgaagagaccaaccag
accgaatttatttttgaacgccttaaccaacagtacaatatagaagtgcaacaaaaatct
aaacttttatccacccttatggaacctttgatcattgtttttgttgggatattggtggga
cttatccttgtagccatgtatttgcccatgtttaaactgggaagtgttttggggtaa
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