KEGG   Sediminicola sp. YIK13: SB49_14730
Entry
SB49_14730        CDS       T04145                                 
Name
(GenBank) ATP-dependent DNA helicase RuvA
  KO
K03550  holliday junction DNA helicase RuvA
Organism
syi  Sediminicola sp. YIK13
Pathway
syi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:syi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    SB49_14730
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:syi03400]
    SB49_14730
DNA repair and recombination proteins [BR:syi03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     SB49_14730
    RecFOR pathway proteins
     SB49_14730
SSDB
Motif
Pfam: RuvA_N HHH_5 RuvA_C HHH 5_3_exonuc SeleniumBinding RecR_HhH HHH_2 WIYLD DUF2642
Other DBs
NCBI-ProteinID: ALM08910
LinkDB
Position
3314185..3314766
AA seq 193 aa
MVTHLKGKLVEKNPTHVVIECSGVGYFVNISLHTFSKIGDSESIMLFTHLQVKEDSHTLF
GFAEKSEREIFRLLLSVSGIGSSTARTMLSSLSPGQVRDAIALGDVPTIQGIKGIGAKTA
QRVILDLKDKILKIYDIDEVSATSNNTNKDEALSALEVLGFVRKQAEKVVDKVLGQDPSL
SVENIIKLALKNL
NT seq 582 nt   +upstreamnt  +downstreamnt
atggtgacccatttaaaggggaaattagttgagaaaaatcctacccatgtagtcattgag
tgctcaggggtaggatattttgttaatatttccttacatacattttccaaaattggcgat
tcggaaagcatcatgcttttcacccatttacaggtgaaggaagattcgcataccttattt
ggatttgccgaaaaatctgaacgtgaaatatttagacttttattgtctgtttcggggata
ggatccagtacggcacggaccatgttatcctccttgtcacccggtcaagttagggacgca
attgctcttggtgatgtccccacaatacagggaataaaagggatcggggcaaaaactgcc
caaagggtaatcttggatttgaaggataaaattctcaaaatttatgatatagatgaagtt
tcggctacttcaaacaatacaaacaaagatgaagcgttatcagcattagaggttcttgga
tttgtccgtaaacaagcagaaaaagtggtggataaagttttgggtcaagatccctcacta
agcgtcgagaatataataaaactggcgcttaaaaatttgtaa

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