Sediminicola sp. YIK13: SB49_14730
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Entry
SB49_14730 CDS
T04145
Name
(GenBank) ATP-dependent DNA helicase RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
syi
Sediminicola sp. YIK13
Pathway
syi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
syi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SB49_14730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syi03400
]
SB49_14730
DNA repair and recombination proteins [BR:
syi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SB49_14730
RecFOR pathway proteins
SB49_14730
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Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
HHH
5_3_exonuc
SeleniumBinding
RecR_HhH
HHH_2
WIYLD
DUF2642
Motif
Other DBs
NCBI-ProteinID:
ALM08910
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Position
3314185..3314766
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AA seq
193 aa
AA seq
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MVTHLKGKLVEKNPTHVVIECSGVGYFVNISLHTFSKIGDSESIMLFTHLQVKEDSHTLF
GFAEKSEREIFRLLLSVSGIGSSTARTMLSSLSPGQVRDAIALGDVPTIQGIKGIGAKTA
QRVILDLKDKILKIYDIDEVSATSNNTNKDEALSALEVLGFVRKQAEKVVDKVLGQDPSL
SVENIIKLALKNL
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atggtgacccatttaaaggggaaattagttgagaaaaatcctacccatgtagtcattgag
tgctcaggggtaggatattttgttaatatttccttacatacattttccaaaattggcgat
tcggaaagcatcatgcttttcacccatttacaggtgaaggaagattcgcataccttattt
ggatttgccgaaaaatctgaacgtgaaatatttagacttttattgtctgtttcggggata
ggatccagtacggcacggaccatgttatcctccttgtcacccggtcaagttagggacgca
attgctcttggtgatgtccccacaatacagggaataaaagggatcggggcaaaaactgcc
caaagggtaatcttggatttgaaggataaaattctcaaaatttatgatatagatgaagtt
tcggctacttcaaacaatacaaacaaagatgaagcgttatcagcattagaggttcttgga
tttgtccgtaaacaagcagaaaaagtggtggataaagttttgggtcaagatccctcacta
agcgtcgagaatataataaaactggcgcttaaaaatttgtaa
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