Synechocystis sp. PCC 6714: D082_02540
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Entry
D082_02540 CDS
T03386
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
syj
Synechocystis sp. PCC 6714
Pathway
syj03420
Nucleotide excision repair
syj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
syj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
D082_02540 (pcrA)
03430 Mismatch repair
D082_02540 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syj03400
]
D082_02540 (pcrA)
Enzymes [BR:
syj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D082_02540 (pcrA)
DNA repair and recombination proteins [BR:
syj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D082_02540 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
D082_02540 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
DEAD
ResIII
Viral_helicase1
AAA_11
AAA_22
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
AIE72783
UniProt:
A0A068MUF9
LinkDB
All DBs
Position
complement(236162..238558)
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AA seq
798 aa
AA seq
DB search
MCLPMTVVPDYLAHLNPSQRRAVEHFCGPLLVVAGAGSGKTRALTYRIAHLIRQHHINPE
NILAVTFTNKAAKEMKERLEKIFAQAWAQQEFNQRWELLGEYEQKQLLSKVYKKVTKPLW
IGTFHSLCSRILRYDIDKYRDESGRTWTKKFSIFDENDVQSLFKTIVTKDMDLDEKQFNP
KSIRYQVSNAKNLGQSPSDYLRENHSYKGRVIAEVYQAYQNQLAANNALDFDDLILVPTR
LFQQNESILGYWHRKFNHILVDEYQDTNRIQYDLIRLLSTNGEDRRSEWDWRGRSTFVVG
DADQSIYSFRMADFTILLNFQEDFGDRLGDGETATMVKLEENYRSRENILEAANHLIEHN
SQRIDKVLKPTRSGGDDIILYQADDERDESRFVINKILTLKKNNPELSFGDFAILYRTNA
QSRAFEEQLLNNNIRYNIVGGFRFYDRQEIKDAIAYLRVLVNPADTVSLLRIINTPRRGI
GKSTIEGFVNASKELDIPLWEIITDETSVNTLAGRSAKKTLQFARMLQEIQGQIGDLSAS
EALNLVLEKSNYVEDLKQKGTEEADNRLANLGELDNAVRQFEAESEDPSLVEFLASASLT
SDLDDLEESGDEVSLMTLHSAKGLEFPVVFLVGLEQGTCPHARSLNDPLDLEEERRLCYV
GITRAQENLFLTYARMRYVWGSLETKIPSQFLQELPPDLLADGSMGRKTSSSKFQSDPRG
PSIAQKQARNKAGSQSTKAPPPASSLVWNVGDRVIHKNFGEGVVTHILGKGHKGNLGIKF
PGIGVKIIDPSFAPLQRP
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
ttgtgtttgcccatgactgttgtccctgactacctcgcccacctcaacccttcccaacgg
cgggcagtggagcacttttgtggcccccttttagtggtggccggggccgggtcagggaaa
actagggccttaacctaccgcattgcccatctaattcgccagcatcatatcaatccagaa
aatattttggcggtaaccttcaccaataaggccgccaaagaaatgaaagaacgcttggag
aaaatttttgcccaggcttgggcccaacaggagtttaaccaacggtgggaattactgggg
gaatacgaacaaaaacaattgctttccaaagtatataaaaaagttactaaacctttgtgg
atcggcactttccacagtctctgttcccgcattctccgctatgacattgataaatatcgg
gacgaaagtggtcgtacttggacgaaaaaattttctatttttgatgaaaatgacgtgcaa
agtttgttcaagaccattgttactaaggatatggatttggacgaaaagcaattcaaccct
aaaagtatccgttaccaggtgagcaatgccaaaaaccttggccagtctccgagtgactat
ctacgggaaaatcacagttataaaggtagagttattgccgaagtttaccaggcttaccaa
aatcaattggcggccaataatgccctagattttgatgatttaatccttgtgccgacccgt
ttatttcaacaaaatgagagcattttaggctactggcaccgaaaatttaatcatattttg
gtggatgaatatcaagataccaaccgtatccagtatgatctaattcgtttgctcagcacc
aacggagaagaccgacggtcggagtgggattggcgggggcgttccacttttgttgtaggg
gatgcggaccagtccatttacagcttccggatggcagactttaccattttgctcaatttc
caagaggattttggcgatcgcctgggggatggggaaacggccaccatggtcaaactggag
gaaaattaccgttcccgggaaaatatcctagaggcagcgaaccatttaattgagcataat
agccaacggatcgacaaggtcctaaaaccaacccggagcggcggggatgacattattctt
taccaagcggatgacgaaagggatgagtctcgttttgtgattaataaaattctgacccta
aagaaaaataatcccgaattaagttttggtgattttgccattttgtatcgcaccaatgcc
caatcccgtgcctttgaggaacagttattaaataataatattcgctacaacattgtcggt
ggttttcgcttttacgatcgccaggaaattaaggatgccattgcttacctccgggtgttg
gttaatcccgcggataccgttagtcttttacgtattatcaatactccccggcggggcatc
ggcaaatccaccattgaaggttttgttaatgcctccaaggagttagacattcccctgtgg
gaaattatcaccgatgaaacctctgtgaataccctagccgggcgatcggccaagaaaacc
ctccaatttgcccgcatgctccaggagatccaaggtcagattggcgacctttccgcatcg
gaagccctcaatttggtgttggaaaagtctaactatgtggaagatttgaaacaaaaaggt
accgaagaagcggataaccgtctagcgaatctgggggaattggacaatgcggtacgacag
tttgaagcggaaagtgaggaccccagcctagtggaatttttggcttcagcatccctcacc
tctgaccttgatgatctcgaggaatccggggatgaagtttccctcatgaccctccactcc
gccaaaggtttggaatttccggtggtatttttggtgggtttagaacagggcacttgtccc
cacgcccgcagtttaaatgatcctttagatctggaggaggaacgccgtttatgttacgtg
ggcattacccgggcccaggaaaatctctttttaacctatgcccgcatgcgttatgtctgg
gggtctttggaaactaaaatcccctcccaattcctacaggaattaccgccggacttactt
gccgatggctccatgggtcgcaaaacttcctccagtaaattccagtctgaccctagggga
ccttccattgcccaaaaacaagcccggaacaaggctggttcccagtcgactaaggcaccc
ccgcccgcttcaagtctggtctggaacgttggcgatcgggtaatacacaaaaattttggt
gaaggggtggtgacccacatcttaggcaagggccacaaaggcaatttagggatcaaattc
cccggcatcggagtaaaaatcattgaccctagttttgctcccctccagcgtccttaa
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