Synechocystis sp. PCC 6714: D082_05920
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Entry
D082_05920 CDS
T03386
Symbol
rnd
Name
(GenBank) Ribonuclease D related protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
syj
Synechocystis sp. PCC 6714
Brite
KEGG Orthology (KO) [BR:
syj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
syj03016
]
D082_05920 (rnd)
Enzymes [BR:
syj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
D082_05920 (rnd)
Transfer RNA biogenesis [BR:
syj03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
D082_05920 (rnd)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AIE73121
UniProt:
A0A068MSP3
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All DBs
Position
564529..565182
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AA seq
217 aa
AA seq
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MPSAAILSQFQVFDNDLPEDICQKLLSAKEVAVDTETMGLNPHRDRLCLVQICDPEGNVT
ALRVAKGQEEAPNLTRLMEAPGVTKIFHFARFDTAQLKHTFDIKTYPIFCTKIASKIART
YSSHHGLKTLVQELVGVELDKSSQCSDWGDAANLSKAQLAYAANDVRYLIPLRHKLEKML
AREDRLRLAQRCFECLPVMVTLDLGMYGNVFEHGGPG
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgccctctgccgccattttgagtcagttccaagtttttgataacgatttacccgaagac
atttgccaaaaacttttatcggccaaagaggtggcggtggacacggaaaccatgggttta
aatccccatcgggatcgtctctgcttggtgcaaatctgtgacccagagggcaatgtgaca
gctttacgcgttgccaaaggccaagaggaagcccccaatctgacccgcctcatggaagca
ccgggggtaactaaaattttccattttgcccgctttgacactgcccaactgaaacatacc
tttgacatcaaaacctatccaattttttgtactaaaatagccagcaaaattgcccggacc
tactcttcccaccatggtctgaagacgttggtgcaggaattggtgggggtggaactggat
aagtcttcccaatgttccgattggggggatgccgctaatttgagcaaagcccaattggcc
tatgccgccaatgatgtccgttatttgattcccctacggcacaaattggaaaaaatgtta
gcaagggaagatcggctgcggttagcccaacgatgttttgagtgtttgccggtaatggta
acccttgatttgggtatgtacggcaatgtatttgagcatggtggcccgggttaa
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