Synechocystis sp. PCC 6714: D082_11610
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Entry
D082_11610 CDS
T03386
Symbol
sigA, rpoDI
Name
(GenBank) Group 2 RNA polymerase sigma factor / RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
syj
Synechocystis sp. PCC 6714
Brite
KEGG Orthology (KO) [BR:
syj00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
D082_11610 (sigA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
syj03021
]
D082_11610 (sigA)
Transcription machinery [BR:
syj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
D082_11610 (sigA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
AIE73689
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All DBs
Position
1153351..1154721
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AA seq
456 aa
AA seq
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MCTVWQYLGVASILTDHLIFVHDLGVNEENGMTQTKEPLTKAESPELDQEIELSQYINTD
DIDDDDIDVEDLEQEVAATEGKEKKVRKIRKDAVKKKPYTEDSIRIYLQEIGRIRLLRAE
EEIELARQIADLLELELIRDNLTLQLERQPSELEWGKQVWKLETAKQRLAADKKKEPKKK
DIESYLANPDNELSLENEWSQQPNKNFAAFRRRLFLDRRAKDKMVQSNLRLVVSIAKKYM
NRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVH
LYETISRIKKTTKLLSQEMRRKPTEEEIAEKMEMTIEKLRFIAKSAQLPISLETPIGKEE
DSRLGDFIEADGETPEDEVSKNLLREDLENVLDTLSPRERDVLRLRYGLDDGRMKTLEEI
GQIFNVTRERIRQIEAKALRKLRHPNRNSILKEYIR
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
gtgtgcaccgtctggcaatacctaggggtggcctcgattttgaccgaccatctaattttt
gtacacgacttaggagttaacgaggaaaacggcatgacccagacgaaagagccactcacc
aaagctgaatcccccgaactagaccaagaaatagaactaagccaatatatcaacaccgat
gatattgacgacgatgatattgacgtagaggatttggaacaggaagttgccgccacggaa
gggaaagaaaaaaaagtccgcaaaatccgtaaagatgcggtcaaaaagaaaccctacacc
gaagactcgattcgcatctacctccaggaaattggccggattcgtctgctcagagccgaa
gaagaaattgaactagcccgccaaattgccgacctccttgagctcgaattaattcgagac
aacctcactctacaactggagcgccagccctcagagttggaatggggcaaacaggtctgg
aaactggaaaccgccaagcaacggttagccgctgacaaaaaaaaggaaccgaaaaagaag
gatatcgaaagttatctcgccaatccagacaatgaactgagtttggaaaacgagtggagt
caacaacccaacaaaaattttgccgctttccgtcgccgtctttttctcgatcgccgagct
aaagacaaaatggttcaatccaacctgcgcctagtggtgtccattgccaaaaaatatatg
aaccggggtctctctttccaagacctgatccaagaaggttcccttggcctaattcgggcc
gccgaaaagtttgaccacgaaaaaggctacaaattctccacctatgccacctggtggatc
cggcaagccattacccgggcgatcgccgatcagtcccgcaccatccgtcttcccgtccat
ctttacgaaaccatttctcgcatcaaaaagactacgaaacttctttcccaggaaatgcgg
cgcaaacccaccgaggaagaaatcgccgaaaaaatggagatgaccatcgaaaaactgcgt
ttcatcgccaaatcagcccaacttcccatctccctcgaaacccccattggtaaagaagaa
gactctcgcctaggggacttcattgaagccgacggcgaaacccccgaagacgaagtctcc
aaaaatctcctacgggaagacttagagaacgtcctggataccctcagtccccgggaacga
gatgtactacgcttacgctacggcctagatgacggtcgtatgaaaaccctagaagaaatc
ggacaaatttttaacgtcacccgggagcgtatccgccagatcgaagccaaagctctacga
aaactgcgtcatcccaaccgcaacagcatcctcaaggaatatatccgttaa
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