Synechocystis sp. PCC 6714: D082_18360
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Entry
D082_18360 CDS
T03386
Name
(GenBank) DNA double-strand break repair Rad50 ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
syj
Synechocystis sp. PCC 6714
Brite
KEGG Orthology (KO) [BR:
syj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syj03400
]
D082_18360
DNA repair and recombination proteins [BR:
syj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
D082_18360
Archaeal homologous recombinant proteins
D082_18360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
Rad50_zn_hook
AAA_21
AAA_29
ABC_tran
cobW
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
AIE74364
UniProt:
A0A068MWL2
LinkDB
All DBs
Position
1814402..1817422
Genome browser
AA seq
1006 aa
AA seq
DB search
MIPQQLILKNFLSYQDVSLDFRGLHTACICGANGAGKSSLLEAITWAIWGKCRAESEDDV
LHNGTDQVRVDFQFISNNQTYRIIRSRQRGRSSVAEFQIKSGDNFRTLSAKGLRATQEKI
TATLKLDYETFVNSAYLRQGRADEFMLRKPSERKQILADLLKLDQYELLATRAKDISKEA
KGKINILNDRLQVLEQDLNQRPYVVANQAKLTEEITAIQTEQKQTEWQLQQLQTSQNQRQ
QWQKQATWQQRQCQELAIEIERLDNQQEEIKQQCQNLDKLLEQETVIKANFQNYQRLQTE
EVALAESFQQYQTLQQQRQNLEQQLQRTENELARQIEQELLRLEHLDKQVAELEPILAQQ
QDIEAELNKLKIAKQNLIQLDNLQNQVAPLLQRRYALQADLEKAKAQCQAQLEQRQAIAK
QLKIAIAAIPEQRKAFQALDEEICQLKNKQVYLKRVEEKGQERGHFKERLQENQRLFEKQ
LRELEQKLDLLDSPGATCPLCEQGLDGHYHQQVMEKTEQECQELRNQIWILKEQITLADQ
ELDILRNEYKEIADGLSNLEQLLQHYGQMEAELERSGENHEKLVELNGQIADLELSLTQG
TFAESLQLELTALERELTNLAYDEQTHALARSTVDQLRKGEIRQAKLKEAQIKYRQLTGD
RPGLEQKLLALRSQLQSLGTSSPLRQQWQQVEASIAQLNYDSESHQQLLAELRRQQPWQL
RHQELEQARQQLPILMQRGQEYQALIGDRQQALQERQEELVHLEKQISQYADHGEQIRLL
ENELTQRRQHLDHLLAKKGGLEQLLIQIDTLQGEYEETKQQFEQAKKQFRIHEELGKAFG
KNGIQAMMIENILPQLEAETNYILARLTGNQHHIQFVTQKEGKSSTKNKPKMIDTLDILI
ADAQGTRPYETYSGGEAFRINFSIRLALAKLLAQRSGTALQLLIIDEGFGTQDADGCDRL
VAAITAIASDFACILTVTHMPQFKEAFQQRIEVCKTEFGSQLAIVS
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgataccccaacaattaattttaaaaaatttcttaagttatcaggatgttagtcttgat
tttcggggattgcatactgcctgtatttgcggtgccaatggtgcaggaaaatcttctttg
ctggaggctatcacttgggcaatttggggtaaatgtcgggctgaaagtgaagatgatgtg
ctccataatggcactgatcaagttagggtagactttcaatttattagtaataatcagacc
taccgaattattcgcagtcgccaacggggccgcagtagcgtagcggaatttcaaattaaa
agcggcgataattttcgcaccctttctgctaagggtctcagggcgacccaggaaaagatt
actgccacgttaaagttggattacgaaacctttgtcaactctgcctatcttcgccaaggc
cgagccgatgaatttatgttacgcaagcccagtgaacggaaacaaattctggcggattta
ttaaagctagaccagtatgaattattggcgaccagggctaaggatatttccaaagaagct
aagggtaaaatcaatattcttaatgaccgcttacaagtattagaacaggatttaaatcaa
cgaccttatgtggtggctaatcaagctaaattaactgaggaaattacggcaatacaaaca
gagcaaaaacaaactgaatggcaattacaacaactacaaactagtcaaaatcaacggcaa
caatggcaaaaacaagcaacttggcaacaacggcaatgccaggaattagcgattgaaatt
gaacgattagataatcaacaggaagaaataaaacagcaatgtcaaaatttagataaatta
ctggaacaagaaacagtaattaaagccaatttccagaattaccagaggttacaaactgag
gaagtagcgttagcagaatctttccaacaatatcaaactttacagcaacaacgccagaat
ttagagcaacagttacagcgcacagaaaatgaattagctcggcaaatagaacaagagctc
ttacgcttagagcatttagataaacaggtggcagaattagaacctatattagcccaacaa
caggatatcgaggcagaattaaataaattaaaaattgccaaacaaaacctcattcagctt
gataacctacaaaatcaagttgctccccttttgcaacgtcgttatgctctacaagctgat
ttagaaaaagcaaaggcccaatgtcaggctcaattagaacaacgccaggcgatcgccaaa
caattaaaaatagcgattgctgctattcccgagcaaagaaaagcttttcaggctttagac
gaggaaatttgccaattaaaaaataaacaagtttatcttaaacgggtagaagaaaagggc
caggaacggggccatttcaaagaacgactgcaggaaaatcaaaggttatttgaaaagcag
ttgcgggaactagagcaaaagttagatttgctggatagtcctggtgccacttgtcctttg
tgtgaacagggtttagatggccattatcatcaacaggtaatggagaaaactgaacaagaa
tgccaagaattacgtaatcaaatttggattctcaaggaacaaattacccttgctgatcaa
gaattagatattttacggaatgaatataaagaaattgctgatggtttaagtaatttagaa
caattactgcaacactatggacaaatggaagcggagttggaaagaagtggagaaaaccat
gaaaaattggtggaattaaatgggcaaattgctgacttagagctgagcttaacccaagga
acttttgctgaatctctccaacttgaattgacggctctagagcgagaattaactaactta
gcctacgacgaacaaacccatgccctagcccgttccaccgtagatcagctaaggaaagga
gaaattcgccaagctaagttgaaagaagcccaaattaagtatcggcaattaacaggcgat
cgcccagggttggagcaaaaattactggcattgcgttcccaattacaaagtttgggcacc
agttctcccctgcgtcaacaatggcaacaggtggaagcatccatcgctcaattaaactat
gacagtgaaagtcaccaacaattattggcagaattacggcgtcaacagccctggcagtta
cgacatcaggaactagagcaagctcggcaacaattaccaatcctgatgcaacgaggacag
gaataccaagctctcattggcgatcgccagcaggctttgcaggaaaggcaagaagagttg
gtgcatttggaaaaacagattagccaatacgctgatcatggggagcagattcgactttta
gaaaatgaattgacgcaacgaagacaacacttagatcacctactggcaaaaaaaggtggc
ttggaacaattattgattcaaattgacacgttgcagggagaatatgaagaaactaaacag
caatttgagcaagctaaaaaacaatttcgtatccacgaagaactgggtaaagccttcggc
aaaaatggtattcaagcaatgatgattgaaaacattctaccccagctagaagcagaaact
aattatattttggctcggttaacgggcaaccaacaccatatccaatttgtcacccaaaaa
gaaggtaaaagtagcactaaaaataaacccaaaatgattgatactttggacattctcatt
gccgacgcccagggtacccgcccctatgaaacctactccggaggagaggcttttcggatt
aatttttctatccgtttagccctggcaaaattattggcccaaaggtctggtaccgctttg
caattactaattattgacgaaggcttcggtacccaggatgcagacggttgcgatcgcctg
gtggccgccatcaccgccattgcctcagattttgcctgtattctcactgtcacccatatg
ccccaatttaaggaagcctttcaacaacgcattgaagtgtgtaaaacggaatttggttcc
cagttagccattgttagttag
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