Shewanella yunxiaonensis: KDN34_00260
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Entry
KDN34_00260 CDS
T07775
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
syk
Shewanella yunxiaonensis
Brite
KEGG Orthology (KO) [BR:
syk00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
KDN34_00260
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
S1
HHH_9
YqgF
HHH_7
S1_RRP5
T2SSK
HHH_6
DUF22
Motif
Other DBs
NCBI-ProteinID:
QUN07466
LinkDB
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Position
53674..56025
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AA seq
783 aa
AA seq
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MHNIAQIIAQELDVREQQVAATITLLDEGSTVPFIARYRKEVTGGLDDTQLRTLYSRLGY
LRELNERREVILKSISEQGKMTPELEKALHDADTKTRLEDLYLPFKPKRRTKGQIAIEAG
IEPLAEQLFAAVGDHHLDPEQLSSAYLNADAGFSDEKAVLDGARYILMERFAEDADLLAK
VRRYLTENALLESKVISGKKQEGAKFRDYFEHREPVSQVPSHRALAMLRGRNEGVLSLAL
NADPGTEAKEGSYCEQIIAAHLGWQLSDCAVDRWLRTVVTATWRIKIALQMETEFIAQMR
EAAETEAIKVFARNLGDLLMAAPAGAKATMGLDPGLRTGVKVAVVNDTGKLVAHTTIFPH
APQNQWDKSVRTLATLANMHQVELIAIGNGTASRETDKLAADVIAAVKEQRPHLTKVVVS
EAGASVYSASEFAANEFPDLDVSLRGAVSIARRLQDPLAELVKIEPKSIGVGQYQHDVSQ
SQLSTSLEAVVEDCVNSVGVDVNMASVPLLSQVAGLNRTLAKNIVDYRDENGRFNNRKAL
LNVPRLGPKAFEQAAGFLRIHGGDNPLDESAVHPEAYMLVENISQAKSTPLAAIIGNSAL
LASLNPQDFTTADFGLPTVTDILKELDKPGRDPRGEFKTASFKDGVEAITDLNPEMVLEG
VVTNVTNFGAFVDIGVHQDGLVHISSLTDKFVSDPHTVVKAGDVVKVKVLEVDVPRKRIS
LTMRLDEKAEPKVVQPKANSQPPVHKPAAKANKAPAHKAQEKAKPLNAAMGNAFAEAFAK
LKK
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgcacaatattgctcaaatcatcgctcaggaactggatgttcgtgagcaacaggtagca
gcaaccataacgctgctggatgaaggttctacggtgccatttattgcccgttaccgtaag
gaagttaccggaggcctagacgatacccagttgcgtaccctttatagccgcctcggttat
ttgcgggaactgaatgagcgccgcgaagtcattctgaagtcaattagcgagcagggcaag
atgacgccggaattggaaaaagcgttgcatgacgcggataccaaaactcgcctcgaagat
ctttacctgccctttaagcctaaacgccgaaccaaaggacagattgcgattgaagccggt
attgaaccgctggctgagcaattgtttgcggctgtgggggatcaccatctcgacccagag
caattaagcagcgcataccttaatgctgacgctggcttttctgacgagaaggcggtactg
gatggtgcccgctatatcctgatggaacgttttgcagaagatgcagatctactcgcgaaa
gtaagacgctatttgacagaaaatgcgttgctggaaagtaaagtgatcagcggtaagaag
caggaaggggctaaattccgcgattattttgaacatagagaacccgtcagtcaggtgccc
tcacatcgcgcgctggcgatgctacgcggtcgcaatgaaggtgtgctcagtttggcacta
aatgctgatcccggcactgaggctaaagaaggcagttactgtgagcagataattgccgcg
catctgggttggcaattatctgactgcgcggttgatcgttggttacgaactgtagtgact
gcaacctggcgcattaaaattgcactgcagatggaaaccgaatttatcgcgcagatgcgt
gaagctgcggaaacggaagctatcaaagtgttcgcccgtaatcttggcgatttgttgatg
gcagcgccggcaggtgccaaagcgacaatgggattagatcccggtttgcgtaccggtgtg
aaagtggctgtagtgaacgataccggtaagctggtggctcacaccaccattttcccacat
gcgccacaaaaccagtgggacaagtcggtaagaaccttggcaacgctggctaacatgcat
caggtggagttgatcgctatcggtaatggcactgcttctcgggaaacggataaattggcg
gcagatgttatcgccgcagttaaagaacagcgcccacatctgaccaaagtggtggtgagt
gaagccggggcttcggtgtattcagcttccgaatttgcggccaatgaattcccggattta
gacgtgtcactgcggggcgcggtgtctattgcccgccgtttgcaggacccgcttgccgaa
ctggtaaaaattgaacccaaatcaattggggtgggtcagtatcagcatgatgtcagccaa
agtcagttgtccacgtcactggaagcggtggtagaagactgtgtaaacagtgtcggtgta
gacgtgaatatggcgtcggttccattattgagccaggtggcaggacttaaccgcacattg
gcaaaaaatatcgtcgattatcgcgatgaaaatggccgcttcaataatcgtaaagcgtta
cttaacgtgcctcgccttgggccgaaagcgttcgagcaggcggctggcttcttgcgtatt
catggtggcgataatccattggatgagtcagctgtgcatcctgaagcctacatgctggtg
gaaaatatctcgcaagccaaaagcacgccattagcagcgatcatcggtaactccgcactg
ctagccagtctgaacccacaggatttcacgactgcagattttgggctgccaacggttacc
gatattctcaaagagctggataaaccgggtcgtgacccgcgcggagaatttaaaaccgcg
agctttaaagatggtgttgaagctatcaccgatctaaatccagaaatggtgctggaaggg
gttgtcaccaatgtgactaactttggtgcgtttgtggatatcggggtgcatcaggatgga
ctggtacatatctcgtcgctcacggataaatttgtgagcgatccacacacagttgtgaaa
gccggtgatgtggtcaaagtgaaggtgctggaagtagacgtaccgcgcaaacgcattagt
cttaccatgcgactcgatgagaaggccgaacctaaagtggtgcagccaaaagccaattcg
cagccgcctgtgcataaacctgccgcgaaagccaataaggcccctgcacataaagcacag
gaaaaagctaagccgttaaatgcggcgatgggaaacgcttttgctgaggcatttgccaaa
cttaaaaaatag
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