Shewanella yunxiaonensis: KDN34_00340
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Entry
KDN34_00340 CDS
T07775
Name
(GenBank) ribonuclease T
KO
K01166
ribonuclease T2 [EC:
4.6.1.19
]
Organism
syk
Shewanella yunxiaonensis
Brite
KEGG Orthology (KO) [BR:
syk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
syk03016
]
KDN34_00340
Enzymes [BR:
syk01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.19 ribonuclease T2
KDN34_00340
Transfer RNA biogenesis [BR:
syk03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
KDN34_00340
Prokaryotic type
KDN34_00340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_T2
Motif
Other DBs
NCBI-ProteinID:
QUN05978
LinkDB
All DBs
Position
complement(70773..71789)
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AA seq
338 aa
AA seq
DB search
MPITEYRFNLSGKVKTILSITLLLGICHNSLAAPVDDGSFIADRKCPLYQSKNKHTNPNN
LFSTPGQEFIVKEVLGTPNPHWFRVTTESPQAPLRWIAAECGHLKTPAIVAAPVANKCNL
QQHFDSQVLALSWQSAFCELHGSNKPECKAISRKSYAAGHFTLHGLWPNNSNCGNSYGYC
GAVKQQPKNFCDYPALPLDDKTSSTLKQLMPSYAYGSCLERHEYWKHGSCRDEQPNHYFQ
LATELAQQVNDATPLISFISYHLGGTVKKQDFINAWKQAFGAGSEHKLTLKCDNQMLTEI
RISLPATIADDAPLTQLLTEAAAVRPGNCGRKFRIDRP
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgccaatcactgaatatcgttttaatctgagcggtaaggttaaaaccatattaagcatc
acgctgttactggggatctgccacaacagcctggctgcacctgtcgatgacggtagcttt
atcgccgatcgcaaatgtccgttatatcaatcgaaaaacaagcacaccaaccctaacaac
ctgttcagtacgcccggacaagagtttattgttaaagaagtgcttggaacgccgaaccca
cactggtttagggtaacaaccgagtcgcctcaagcgcctttacgctggattgccgctgaa
tgcggtcatctcaagaccccggcgattgttgcggccccagtcgctaacaaatgtaatctg
cagcagcacttcgacagtcaggtattagccctatcctggcaaagtgctttttgtgagtta
catggcagcaataagccggaatgcaaagcgatatctcgcaagagttatgcggcgggacat
ttcacgctgcacggcttatggcccaataacagcaattgtggcaacagctatggttattgt
ggtgcggtcaaacagcaaccgaaaaatttctgcgattatccagcactgcctctcgatgac
aaaacatcttcgacgttaaaacagctgatgcccagctatgcttacggcagctgtctggaa
cgacatgagtattggaaacacggtagttgccgcgatgaacagcccaatcactatttccaa
ctcgccaccgagctcgcccaacaggtcaatgatgcgacaccacttatcagtttcatcagt
tatcacctcggcggcacagtgaaaaagcaggattttatcaacgcctggaaacaagctttt
ggcgccggaagtgagcataagctgacgctgaaatgtgataaccagatgttgactgaaatc
cgcatctcactgccagcaaccattgcggatgacgccccactgacacaattattgactgaa
gctgcagcagttcgcccaggcaattgtggccgaaaattccgtatcgaccgcccttaa
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