Shewanella yunxiaonensis: KDN34_01115
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Entry
KDN34_01115 CDS
T07775
Symbol
slmA
Name
(GenBank) nucleoid occlusion factor SlmA
KO
K05501
TetR/AcrR family transcriptional regulator
Organism
syk
Shewanella yunxiaonensis
Brite
KEGG Orthology (KO) [BR:
syk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
syk03000
]
KDN34_01115 (slmA)
03036 Chromosome and associated proteins [BR:
syk03036
]
KDN34_01115 (slmA)
Transcription factors [BR:
syk03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
KDN34_01115 (slmA)
Chromosome and associated proteins [BR:
syk03036
]
Prokaryotic type
Chromosome partitioning proteins
Inhibitors of FtsZ assembly
KDN34_01115 (slmA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SlmA-like_C
TetR_N
HTH_11
HTH_Tnp_1_2
DUF2709
TetR_C_13
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
QUN06112
LinkDB
All DBs
Position
complement(219951..220541)
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AA seq
196 aa
AA seq
DB search
MTKEKINRRDHILQSLAQMLETNPGQRITTAKLASEVGVSEAALYRHFPSKARMFEGLIE
FIEESLLSRANLIMTEEKDTMRRCQLMLQLLLVFAERNPGISRLLNGDALLGEHERLRER
VNQIFAKFETNLKQILREKSLREGQKFHLDEGILANMLLAVAEGRIAQFVRSEFHQKPTK
HFEEQWLFIQKQLLQS
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagaaaaaatcaatcggcgggaccatatcctgcagagtctggcgcaaatgctg
gaaactaatcctggtcaaaggatcactaccgcaaagctagcctctgaagtgggcgtttct
gaagcggcgctgtaccgccatttccccagcaaggcacggatgtttgaaggtcttatcgaa
tttatcgaagagtctttgctgtctcgcgccaatctgattatgacggaagaaaaggatacc
atgcgacgttgccaactcatgctgcaactattgctggtatttgccgagagaaaccccggg
atttcacgcctactcaacggtgatgcgttgctcggcgaacacgagcgtttgcgagagcgc
gtcaatcaaattttcgcaaaattcgaaactaacttaaaacagatactgcgtgaaaagtct
ttaagagaaggtcaaaaattccatttagatgaaggcattctcgccaatatgttgttagcc
gtggcagagggacgtattgcacaatttgtgcgcagcgaattccaccagaagcctaccaaa
cactttgaagaacagtggttatttattcagaaacaactgctgcaaagttaa
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