Shewanella yunxiaonensis: KDN34_01205
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Entry
KDN34_01205 CDS
T07775
Symbol
rsmH
Name
(GenBank) 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
KO
K03438
16S rRNA (cytosine1402-N4)-methyltransferase [EC:
2.1.1.199
]
Organism
syk
Shewanella yunxiaonensis
Brite
KEGG Orthology (KO) [BR:
syk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
syk03009
]
KDN34_01205 (rsmH)
Enzymes [BR:
syk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.199 16S rRNA (cytosine1402-N4)-methyltransferase
KDN34_01205 (rsmH)
Ribosome biogenesis [BR:
syk03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
KDN34_01205 (rsmH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_5
Methyltransf_31
Methyltransf_25
FtsJ
DUF494
HAGH_C
Motif
Other DBs
NCBI-ProteinID:
QUN06129
LinkDB
All DBs
Position
238748..239689
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AA seq
313 aa
AA seq
DB search
MSQNYAHQSVLLQEAIDGLNIRPDGIYVDGTFGRGGHSRQILSRLGPNGRLIAIDRDPQA
IAAAEALADDTRFSIIHGGFGGLAGYIDDLGLTGKIDGVLLDLGVSSPQLDDADRGFSFL
RDGPLDMRMDNSKGETAAEWLARADVEDMAWVFKTYGEEKNARHIARCIAADRDTTPFLR
TKDLASLIERITKQRERNKHPATRVFQAIRIYINSELDQIQQALDGALAVLAPAGRLSVI
SFHSLEDRLVKRFMRHHSQAAEVPYGLPVTEDQLQQNRKLKTLGKAIKPSDAELDVNARA
RSSVLRVAERLGD
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagaattacgcgcaccagtcggttttgctgcaggaagcaatcgacggtttgaat
atccgccctgatggcatttatgtcgacggtacttttggtcgtggtggtcactcgcgtcaa
attcttagtcggcttggacccaatggccgcttaatcgctatcgaccgtgacccgcaagcc
attgctgcggctgaggcgctggctgatgatacgcgtttctctattattcacggtggtttt
ggtgggctggcaggctacatcgatgacttaggattgaccggcaagatcgacggggtactg
ttagaccttggcgtttcttctccacaacttgatgatgcggaccgtggtttcagtttcttg
cgtgatggcccattagacatgcgcatggacaacagtaagggtgaaactgcggcagagtgg
ttggctcgcgctgatgttgaagacatggcctgggtatttaaaacctatggcgaagagaaa
aatgcccggcatatcgcccgttgtatcgcggctgatcgtgacaccacgccttttttacgc
accaaagatctggcctcactcattgaacgcattactaagcagcgtgaacgcaacaaacat
cccgctaccagggtgtttcaggcgatccgtatttacatcaatagcgaactggatcaaatc
cagcaggcgctggatggtgctttagccgtattggcacccgcaggccgcttatcagtgatt
agctttcattcgctggaagatcggttagtcaaacgctttatgcgccaccacagtcaggcg
gcagaagtcccttatggtttgcccgtaacagaagatcagttgcaacagaatcgcaaactg
aaaacgcttggcaaagccatcaaaccttcagatgcagaacttgatgtgaacgcccgtgct
cgcagttcggtgttgcgcgtcgcagaacgcttaggggattga
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