Shewanella yunxiaonensis: KDN34_01615
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Entry
KDN34_01615 CDS
T07775
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
syk
Shewanella yunxiaonensis
Pathway
syk02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
syk00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
KDN34_01615
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
syk02000
]
KDN34_01615
02044 Secretion system [BR:
syk02044
]
KDN34_01615
Transporters [BR:
syk02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
KDN34_01615
Secretion system [BR:
syk02044
]
Type I secretion system
Adhesin protein transporter
KDN34_01615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
Peptidase_C39
AAA_15
AAA_13
AAA_29
AAA
AAA_23
DUF87
MMR_HSR1
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
QUN06196
LinkDB
All DBs
Position
complement(338082..340259)
Genome browser
AA seq
725 aa
AA seq
DB search
MSTAASPKTEQWTIPASIRVTVDPLLDCLVLMTEYYGSPCSIESLVAGLPLSTAELPPEL
LPQAAARAGLAAKLSRKGLDQVSAIQLPCILLLRDKKACILRQLSFDDQKAVIQLPETGG
EQTLSIEELETLYVGYLFLIKQQYRGDMGFDVYRHDQKTHWLLQTVKDAAPIYRDALIAS
LLVNIFALVSPLFVMNVYDKVVPNLAFESLWVLAAGAGIAYLFDFIMRQLRSYLIDIAGK
KVDILVSSRLFFKAIGLPLAKRSASVGGMARQLGEFDSIRDFLTSATITALVDLPFALLF
MVIIFLVAGDLALVPVIASVIIIVFTLTIQPRLKKAIEESNRFSSLKHGHLIESLASLES
IKAYGAEGLVQKSWQQMIGHTANWQLKVKKLSNAVSHVASLVVQMTTIFVVILGVYRVSD
NLISMGGIIAAVMLSSRAVSPMAQLAGLMTRANQMVSALRQLDGIMLQEDEFENKGHLVS
KQRLIGKIEADNVTFSYPSSEKQVLSPLSFQIQPGEKIAIIGRNGSGKSTLAKLLVGLFQ
PTGGSLRFDGVDSGQIHPSDLRRNFGYLPQDVTLFHGTIRDNILFGTRQVSEHQLMRAVQ
LSGVALFTAMESEGLDTQVGEKGENLSRGQRQTIALARAILNDPPILLMDEPTASLDARA
EKQFMRSMTHVSKERSLIIITHKMELLKLVDRIIVLDRGHILADGPKAKVLELLNNGLMA
GGRNE
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaccgctgcttctcccaaaactgagcaatggaccatccctgcctcaatacgagtc
actgttgatccactactggactgtctggtactgatgaccgagtactatggcagtccatgt
tctattgaatcattagttgctggcctacccttatcaactgcagagcttccaccagagtta
ttaccgcaagcagctgctcgagccggactcgcagcgaagttaagtcgtaaaggacttgat
caggtgagtgccattcaactgccctgtattttattattgcgggataaaaaagcttgtatc
ctcagacaactaagctttgacgatcaaaaggctgtcattcaattacccgagacaggtgga
gaacaaacactttctattgaagagctggaaacgctctatgtcggttatctattccttatc
aaacaacaataccgtggcgatatgggatttgatgtttatcgacatgatcaaaaaactcac
tggctacttcaaactgttaaggatgctgcacccatataccgtgacgcacttattgcatct
ttgttggtgaatatttttgcgttggtgtcaccgctgtttgtcatgaacgtctatgacaaa
gtcgtgcccaatctcgcgttcgaatctttgtgggtgctcgccgcaggagcaggcatagct
tatctttttgattttattatgcgacaattgagaagctatctgattgatattgccggtaaa
aaagttgacatcctggtttcatcaaggctgttttttaaagctatcggcttaccattagca
aagcgctccgccagtgtaggaggcatggctaggcagcttggcgaatttgacagtatcagg
gactttctgacttcggcaacgattactgcgctggttgatctccctttcgcattgctgttt
atggtgattatttttctggttgcaggtgacttggcgttagtcccagtgatcgccagtgtg
atcattattgtgttcacgctaacgattcagcctcggctgaaaaaggcgattgaagaaagc
aaccgtttctcaagcctaaaacatgggcacctcattgaaagcttagcgtctttggaatcg
atcaaagcgtatggcgcagaagggttagttcagaagtcctggcaacaaatgatcgggcat
actgcgaactggcagctgaaagtcaaaaaattatctaacgccgtctcccatgttgcgtca
ttagtcgtgcaaatgacgactatttttgtggtcattctcggggtctatcgagtatcagat
aacctgatatcgatgggcgggatcattgctgcggttatgctctctagtcgtgccgtttcc
cctatggctcagcttgcggggttgatgactcgcgctaaccagatggttagtgcgttgcgt
caactggacggcatcatgctgcaagaagatgaatttgagaacaaaggccatctggtcagc
aagcaaaggctgatcggtaagatcgaagccgataacgtcacattcagctatccatcttct
gaaaaacaagtgttgagtccgctatcatttcaaatacagccaggagaaaaaattgccatc
attggcagaaacggcagcggtaaaagcacgttagctaaactattggttggtctgtttcaa
ccgacgggcggtagtttacgttttgacggcgtcgattcaggacagatccaccccagcgat
ttacgtcgtaacttcggctatctgccgcaggatgtcaccctgtttcatggcaccattcgc
gataacattctgttcggcactcgccaggtttcagaacatcaattaatgcgcgccgtgcaa
ctttcaggtgttgccctgtttacagcaatggagtctgaaggtcttgatacccaggtaggc
gaaaaaggtgaaaatctttctcgtggtcaacggcaaactatcgctctggcacgagcaatt
ttgaacgatccccccattctgctgatggacgaacccactgcgagccttgatgccagagca
gaaaaacaattcatgcggtcgatgactcatgtcagcaaagaacgctcgctgatcattatc
acccacaaaatggagctgctgaagcttgtggatcgcatcatcgtcttggatcgtggtcat
attctagcagatggacctaaggccaaggtgctggagctactcaataatggcttgatggca
ggaggcagaaatgagtaa
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