Shewanella yunxiaonensis: KDN34_01665
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Entry
KDN34_01665 CDS
T07775
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
syk
Shewanella yunxiaonensis
Pathway
syk00300
Lysine biosynthesis
syk00470
D-Amino acid metabolism
syk01100
Metabolic pathways
syk01110
Biosynthesis of secondary metabolites
syk01120
Microbial metabolism in diverse environments
syk01230
Biosynthesis of amino acids
Module
syk_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
syk00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KDN34_01665 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KDN34_01665 (dapF)
Enzymes [BR:
syk01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
KDN34_01665 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
CntK_N
Pro_racemase
Motif
Other DBs
NCBI-ProteinID:
QUN06205
UniProt:
A0ABX7YU88
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All DBs
Position
359468..360295
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AA seq
275 aa
AA seq
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MIQFTKMHGLGNDFMVVDAVTQNVFFSPEQIRRLSDRNFGVGFDQLLLVEPPYDPDLDFH
YRIFNADGSEVEQCGNGARCFARFVRNKGLTIKQKIKVSTSAGKMTLRLERDGNVTVNMG
VPVTDPGRIPFKAKKAEKTYLLQTESQTFLCGAISMGNPHCVIEVDDVSTTDVPQLGAML
TNHERFPKGVNVGFMQIVNEGHIKLRVYERGAAETLACGSGACAAAAVGQLQGKLNQVVR
VDLPGGSLTINWEGEGKPLWMTGPAEHVYDGQIQL
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
ttgattcagttcactaaaatgcacggtttgggcaatgactttatggtcgttgatgctgtg
acccagaacgtattcttttcgcctgagcagatccggcgattgtctgaccggaatttcggg
gtcgggtttgaccaactgttgctggttgaaccgccgtatgatccggatttagatttccac
taccgtatttttaacgccgacggctctgaagtggagcagtgcggtaatggcgctcgctgt
ttcgcgcgatttgtgcgcaataaaggcctgaccattaagcaaaagattaaggtgagcacc
tccgcgggcaaaatgaccctgagactggaacgtgatggtaacgtgacggtgaatatgggg
gtgccggttaccgatcccggtcgcattccttttaaggccaaaaaagctgaaaagacctat
cttttacagacagaaagtcagacgtttctgtgtggtgccatctcgatggggaatccccac
tgtgtgattgaggtggatgatgtcagcacgactgatgtgccacaattgggtgcaatgctg
accaaccatgaacgttttcccaaaggggtgaatgtaggctttatgcagattgtcaacgaa
ggccatattaaactgcgggtatatgaacgcggtgcggcggagacactggcttgtggtagt
ggcgcctgtgctgccgctgctgtggggcaactgcaaggtaaattaaatcaggtagtacgg
gtcgaccttcctggtggcagtttaaccatcaactgggaaggtgaaggtaaacctttatgg
atgacaggaccggcagaacacgtgtacgacggacaaatacaattatga
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