Shewanella yunxiaonensis: KDN34_02080
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Entry
KDN34_02080 CDS
T07775
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
syk
Shewanella yunxiaonensis
Brite
KEGG Orthology (KO) [BR:
syk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
syk03032
]
KDN34_02080
03036 Chromosome and associated proteins [BR:
syk03036
]
KDN34_02080
03400 DNA repair and recombination proteins [BR:
syk03400
]
KDN34_02080
DNA replication proteins [BR:
syk03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
KDN34_02080
Chromosome and associated proteins [BR:
syk03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
KDN34_02080
DNA repair and recombination proteins [BR:
syk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
KDN34_02080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-DNA_bdg
HU-CCDC81_euk_1
tRNA_anti-like
Motif
Other DBs
NCBI-ProteinID:
QUN06280
LinkDB
All DBs
Position
complement(450780..451052)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTELIANMAEKAELTKAEATLALKSLESAVTEALKAGDKVSIVGFGSFETSTRAARTG
RNPLTGQEIQIAEATVPKFKAGKALKDSVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaactgaactcattgccaacatggcagagaaagctgaacttacaaaagctgaa
gccactctggcacttaagtccttagaatctgcagtaacagaagcactcaaagccggtgat
aaagtatctattgtggggtttggctcttttgaaacatcaactcgcgctgccagaacaggt
cgtaatcctctgacaggtcaggaaattcaaattgctgaagccactgtgcctaaattcaaa
gctggcaaagcattaaaagacagcgtgaactga
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