Shewanella yunxiaonensis: KDN34_02430
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Entry
KDN34_02430 CDS
T07775
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
syk
Shewanella yunxiaonensis
Brite
KEGG Orthology (KO) [BR:
syk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
syk03021
]
KDN34_02430 (rapA)
Transcription machinery [BR:
syk03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
KDN34_02430 (rapA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_34
UPF0367
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
QUN06343
UniProt:
A0ABX7YUB3
LinkDB
All DBs
Position
complement(520627..523533)
Genome browser
AA seq
968 aa
AA seq
DB search
MPFALGQRWISDTESELGLGTVVQLEGRMVTLLFPATGENRIFSRNEAPLTRVIYNPGDK
VKSHEGWTLEIQRTEEIDDLVHYHGINSDSGEQVCLRETLLDHNIRFNKPQDRLFAGQID
RMDRFGIRYQAQRLRHDLATSPMLGLQGPRVGLIPHQLWIASEVGQRHAPRVLLADEVGL
GKTIEAGLIIHQQLMTGRAERVLILVPDTLRHQWLVEMLRRFNLRFSVFDEERCVEAFAD
HDNPFYTEQLVICSLDLLKQKRRLDQALDADWDLLVVDEAHHLEWTADKPSRAYQIVEAL
AQVIPGVLLLTATPDQLGHESHFARLRLLDPNRFYDYQAFIKEEQDYRQVATAADAIASG
RKLPDDAIELLTELLAEKDIIPAIKLIQADNIAPEQQQQARDELLQQLLDRHGTGRVLFR
NSRASVKGFPQRIFHSYPQPMPEQYETAMRVALTMNRNLPDETQARLMLTPEKLFQQFDE
QSAAWWKFDPRIDWLIEFLKNHRSKKVLIITSQAATALSLEEALRTREGILTTVFHEGMS
IIERDKAGAFFAQEEGGAQALICSEIGSEGRNFQFASHLVLFDLPLNPDLLEQRIGRLDR
IGQQNDVQIHLPYIEDCAQSRLLDWYHQGLNAFEQTCPVGHILFKEFSEELLPLLVHADD
ESMTSLLNRVRAQYKELKQAMEQGRDKLLELNSNGGDRAKALAWQLAEMDNDTQLIGSVI
RLWDVIGVDQEDKGENTIVLHPSEHMMFPTYPGLPEDGITVTFDRNTALSRDDIALITQE
HPLVQTGLDLVTGSDTGTTCVSLLKNKALPAGTLFLELIYIADASAPKASQLFRYLPTTP
IRVLLDKDGNNLASKVTYDQWERQLSPVNRHIGSKLVNASQPLLHPLLAKGEQHGQDAMA
QLIQQARQQMESSLLSELERLEALQTVNPNIREDELEYLREQIRELNGYLDNCQLQLDAI
RLVLVSHV
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccattcgctttaggtcaacgttggatcagtgatacggaatcagagcttggattgggc
acagttgtgcaactggaaggccggatggtcaccctgctatttccggcaaccggagaaaac
cgtattttttctcgaaatgaagccccgctgacccgcgtgatctacaaccccggtgacaaa
gtcaaaagccatgaaggctggacgctggaaattcagcgtaccgaagaaattgatgattta
gtccattaccatggcatcaatagtgacagtggcgaacaagtctgcctcagagaaacctta
ctcgaccataacattcgctttaataaaccgcaggatcgcttattcgccggccagatagac
cgcatggatcgttttgggatccgttatcaggcacaacgtctgcggcatgatctcgccacc
tcaccgatgctcggattgcaaggtccgcgggtcggtttgatcccgcatcagctgtggatt
gcctctgaagtgggtcagcgccatgcccctcgagtgctactggccgatgaagtaggtctg
gggaaaaccattgaagcgggcctcatcatccaccagcaattgatgaccggtcgagccgaa
cgggtactcattctggtaccagacaccttacgtcatcagtggttagtcgagatgttacgc
cgtttcaacctgcgcttttccgtgtttgatgaagagcgttgtgtggaagcgttcgccgat
cacgacaacccgttttacaccgaacagttggtgatctgttcgctggatctgttgaaacaa
aaacgccgtcttgaccaggctctggatgccgactgggatttactggtggtagatgaagcg
catcacttggaatggacagccgacaaacccagccgtgcgtatcagattgttgaggcgtta
gcacaggtaatacctggtgtgctgctgctcaccgcaacccccgatcagttggggcatgaa
agtcactttgccagactcaggctgctcgatcctaaccgcttctacgactatcaggcattt
atcaaagaagaacaggattatcgccaggtagcaaccgccgcggatgccattgccagcggt
cgcaagttacccgatgatgcgattgaacttctgaccgaactgctggcggaaaaagatatt
attccagccataaaactgatccaggcagacaatattgcgccagaacaacagcaacaagcg
cgcgatgaattgctgcagcaattactggatcggcacggtactgggcgagtcctgttccgt
aacagcagagcctcagtaaaaggttttccgcagcgcatattccacagctacccacagccg
atgcccgagcaatatgaaacggccatgcgcgtagcgctgaccatgaatcgcaacttgcca
gatgagacccaagcccgccttatgttgacaccggaaaagctgtttcagcaattcgatgaa
caatcagcggcatggtggaagtttgatccgcggatcgactggctaatcgaatttctgaaa
aatcatcgcagcaagaaagtgttgattatcacttcccaggcggcaaccgcattgagtctg
gaagaagcattgcgcacccgagaagggatactgaccaccgtgttccacgaaggcatgtcc
atcattgaacgcgataaggcgggtgccttctttgcccaagaagaaggtggcgcacaggcg
ctgatctgctcagaaatcggctcagaaggtcgtaacttccagttcgccagccatctggtc
ttattcgacctgccactgaatcctgatctgttggaacaacggattggacgtctggaccgt
attggtcaacaaaatgatgtacagatccatctgccctatatcgaagactgcgcgcaatca
aggttgctcgattggtaccatcagggactgaacgcttttgagcaaacctgtccggtcggc
catatcctattcaaggaattttctgaagaactgttgccgttacttgtccatgctgatgac
gaatccatgaccagtctgctcaatcgcgtgcgggcgcaatacaaagagttgaaacaggca
atggaacaagggcgggacaaattgctggaactcaactcaaacggcggtgatcgcgccaaa
gcgctggcttggcaactggcagagatggacaatgacacccaactgatcggttcggttatc
cgcttgtgggatgtgatcggtgtcgatcaggaagacaaaggcgaaaacaccatagtgctg
catccgagtgagcacatgatgtttccaacttatccgggattaccagaagatgggattacc
gtgacctttgaccgcaacaccgcgttgtcgcgtgatgacattgctttaatcactcaggag
catccgctggtacaaaccggtctggatctggtcaccggttcggatacggggacaacgtgc
gtttcgctattaaaaaacaaagccttgcctgctggcactctctttctggaattaatctac
atcgctgatgcgtccgcaccgaaagccagtcagctcttccgctatctgccgacaacgcct
atcagggtcttgctcgataaagatggcaataatctggccagtaaagtgacttatgaccaa
tgggaacggcagttgagtccggtaaatcgccatattggcagcaaactggtaaatgcttca
cagccattgctccacccgttgctggccaaaggagagcaacatggacaggatgcaatggca
cagttgatacaacaagcccggcaacagatggaatccagcttgctgagtgaactggaacgc
ctggaagcgttacagacggtaaatcccaatattcgtgaagatgaactggaatacctgcgg
gaacagatacgagaactcaatggctatctggataactgtcaattgcagctcgacgccatc
agattagtactggtcagtcacgtgtaa
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