Shewanella yunxiaonensis: KDN34_03570
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Entry
KDN34_03570 CDS
T07775
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
syk
Shewanella yunxiaonensis
Pathway
syk00550
Peptidoglycan biosynthesis
syk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
syk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KDN34_03570 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
syk01003
]
KDN34_03570 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
syk01011
]
KDN34_03570 (mrcB)
Enzymes [BR:
syk01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
KDN34_03570 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
KDN34_03570 (mrcB)
Glycosyltransferases [BR:
syk01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
KDN34_03570 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
syk01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
KDN34_03570 (mrcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
QUN06549
UniProt:
A0ABX7YUV6
LinkDB
All DBs
Position
753320..755644
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AA seq
774 aa
AA seq
DB search
MTTAKNNRKPTNKKPAKKAAASGNSSFWGGFWSVGWKLALVTTAVLAVYCIYLDQIIARK
FEGQKWYLPAQIFSRSMALYPGAPVSHGQFIDELKLLGYRKVANPRQIGEFSASSSRVEL
WRRPFLHPEGQQPAQQVMVSFDVNGVASVERLSDHRQLAVFHLEPVLLDRIVTGDGEDRL
FVPTKEIPETVVEGLILTEDRSFYEHYGINPLAIVRAAMVNLSAGRTVQGGSTLTQQLAK
NFFLSSERSLIRKIREALMAVIIDARYSKQEILEAYLNEVYMGQDHNRAIHGMGLASQFY
FGRPIGELTVAQQALLVAEIKGPSYYNPWRYPQRAQERRDLVLRLMMEGNKINVDQYKVA
VSSPLGLRNAARPVHQKLPAFFARVKQELRDRYGDALLKQSGIKVYTTLDPLAQEAAEKA
VSATLKSLDSKNSGLQAGMVVTERYTYGIAAMVGDRNPGYDGYDRAEEIRRPIGSLVKPF
VYATALAQGTKYNLFTPLKDEPITLKNEQGQTWSPKNDDRQFSGQVPLLTALTNSMNVPT
VNLGMAIGLDAIATTLRQSGWSESVPAYPSMLLGAVNGSPLMVAQIYQTLANNGHYRQLN
AVTAVLDKDNQPLQVSYLPQSEAIDPAVNYLVQYALTQVVQSGTAAKLGAAFPGVTLAGK
TGTSNDQRDSWFAGFDERNVAAIWVGRDDNGKTGLYGSSGAMAIYRNFLNERAPLSLRLP
PVNGVVQGYFDRDTGIARQRDCRAVVAAPALADSYHPADNCGDSSPWWKRMFGG
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgacaactgcgaaaaataaccgaaagcccactaacaaaaagcccgccaaaaaggcggct
gccagcggtaactctagcttttggggcggattttggtccgtaggctggaaactagcattg
gtcactaccgcggtgctggcggtttattgtatctacctggatcagatcatcgcccgcaaa
tttgaagggcagaaatggtatctgccggcgcagattttcagccgttcgatggcgttatac
cccggtgcgccggtcagtcacggacagttcatcgatgaactgaaactgctgggttatcgt
aaagtggcaaatcccaggcagatcggcgagttttcagcgtcatccagccgcgtggaattg
tggcgtcgaccgtttttacaccctgaaggtcagcaaccggcacagcaggtgatggtgagc
ttcgatgttaatggggtggcgtcagttgagcgcctgagcgatcatcggcaattggcggtg
tttcatctggagccggtattactcgatcggattgtgaccggtgatggcgaagatcggttg
tttgtcccgacgaaggagatccctgaaaccgtggtggaaggcttgatcctgaccgaagat
cgcagtttttacgaacactatggcattaatccgctggcaattgtgcgggcggcgatggtg
aacctcagcgccgggcgcaccgtgcaggggggctcaacgttgacccagcagttggccaag
aatttctttctttccagtgaacgctcgctgatccgcaagatccgtgaagccctgatggcc
gtgatcattgatgcgcgctacagcaaacaggaaatcctcgaagcctatctgaatgaagtt
tacatggggcaggaccataaccgggcaattcacggcatggggttggcctcccaattttat
tttggccgaccgatcggcgagctgaccgtcgcacaacaggcgctattagtggcagagatt
aaaggtccgtcttattacaacccttggcgttatccgcagcgggctcaggaacggcgcgat
ctggtgctgcgactgatgatggaaggcaacaaaattaatgtggatcaatacaaggtggca
gtgtcatccccgctggggctacgtaatgcggcgcggcctgtgcatcagaaactgccggcc
ttttttgcacgagtaaagcaggagctgcgtgaccgttacggtgatgcattactgaagcag
tccgggattaaggtatataccacgctcgatccgttagcgcaggaagctgctgaaaaagcg
gtgagtgcgaccctcaaatctctcgatagtaaaaacagtggcctacaggcgggtatggtg
gtaactgaacgttacacctatggcatagccgcgatggtgggggaccgtaatcctggttat
gacggttatgatcgggcggaagagatccgtcgtccaatcggttcattggtgaaaccgttt
gtctatgctaccgcactggcgcagggcacaaaatataacctgtttaccccgttaaaagat
gaacccattaccctgaaaaacgaacaggggcagacctggtcacccaaaaatgatgatcga
caatttagcggacaagtgccgttactgacagcgctgaccaactcaatgaacgtgccgacg
gtgaacctcgggatggcaataggtctggatgccatcgcaacgacgctgcggcaatcgggg
tggagtgagtcagtgcctgcttatccatcaatgttgttgggtgccgtcaacggttctccg
ttaatggtggcgcagatttatcagacattggcgaacaatggtcattatcggcagttaaat
gcggttaccgcagtgctagataaagacaatcagcctttacaagtcagttacttaccccag
agcgaagcaattgaccccgcggtgaattatctggtgcagtatgccttaacccaagttgtc
cagtccggcacggctgctaaactcggtgcggcattcccgggggtgacgctcgcaggtaaa
accggcaccagtaacgaccaacgtgattcctggtttgctggatttgatgaacgtaacgtg
gccgcaatctgggttggccgtgacgacaatggtaaaaccgggctttatggcagcagcggt
gcgatggcgatctatcgtaatttcctgaatgagcgtgcgccactgtcgctgcggttaccg
ccggtaaacggtgtggtgcaaggatattttgatcgcgataccgggattgctaggcaacgg
gattgccgcgccgtggtggcggcaccagcattggctgacagttatcatccggcagataat
tgcggtgattcttcaccgtggtggaaacgtatgttcggtggctga
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