Shewanella yunxiaonensis: KDN34_03945
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Entry
KDN34_03945 CDS
T07775
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
syk
Shewanella yunxiaonensis
Pathway
syk00220
Arginine biosynthesis
syk00240
Pyrimidine metabolism
syk00250
Alanine, aspartate and glutamate metabolism
syk01100
Metabolic pathways
syk01110
Biosynthesis of secondary metabolites
syk01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
syk00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
KDN34_03945 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
KDN34_03945 (carB)
00220 Arginine biosynthesis
KDN34_03945 (carB)
Enzymes [BR:
syk01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
KDN34_03945 (carB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
ATP-grasp_3
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_4
RimK
Motif
Other DBs
NCBI-ProteinID:
QUN06615
LinkDB
All DBs
Position
829079..832303
Genome browser
AA seq
1074 aa
AA seq
DB search
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGFRVILVNSNPATIMTDPEM
ADATYIEPIHWEVVRNIIAKERPDAILPTMGGQTALNCALELEAKGVLKEFNVEMIGATA
DAIDKAEDRARFDQSMRKIGLECPRAGIAHSMEDAYKVLDQVGFPCIIRPSFTMGGSGGG
IAYNVEEFEEICTRGLDLSPTNELLIDESLIGWKEYEMEVVRDRNDNCIIVCSIENFDAM
GVHTGDSITVAPAQTLTDKEYQLMRNASMAVLREIGVETGGSNVQFGINPKDGRMVIIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGFTLDELMNDITGGRTPASFEPSIDYVVTKVP
RFNFEKFAGANDRLTTQMKSVGEVMAIGRTFQESVQKALRGLETGKNGFDPIVDWQDPDA
MQRMRHELKEPGAERIWYVADAFRAGMSMDEIYKLTNIDPWFLVQIEELIQLEAKVAATG
LAGMDADFLYKLKRKGFSDARLADVLGISESEMRKLRYRLEIFPVYKRVDTCAAEFATDT
AYMYSTYEEECEANPSNRDKIMVLGGGPNRIGQGIEFDYCCVHASLALKADGYETIMVNC
NPETVSTDYDTSDRLYFEPVTLEDVLEIARIEKPKGVIVQFGGQTPLKLARALEAAGVPI
IGTSPDAIDRAEDRERFQQAIRRLEMKQPENDTVTTVEGAVLAAEKIGYPLVVRPSYVLG
GRAMEIVYEEQDLRRYFKEAVKVSNASPVLLDHFLDDAIEVDIDAVCDGKTVVVGAIMEH
IEQAGVHSGDSGCSLPPYTLSHAIQDEMREQVRKLAFELGVVGLMNVQFAVQKNTIFMIE
VNPRAARTVPFVSKATGVPLAKIAARVMAGQSLEEQGFTKEVIPPYYSVKEVVLPFNKFP
GVDPLLGPEMRSTGEVMGVGDTFAEAYAKAQLGTTSKDIPKSGRALLSVRNSDKKRVADL
AAKLIDLGYEIDATHGTAVVLGEAGINPRLVNKVHEGRPHILDRMKNGEYTYIVNTTEGR
QAIEDSKQLRRGALRYKVNYTTTMNAAFATCMANTADDRNKVSSVQELHARVTK
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtactgatataaaaagtattcttatcctaggtgccggtcccatcgttatc
ggtcaggcctgtgagtttgactattccggtgcccaggcttgtaaagccctgcgtgaagaa
ggtttccgtgtcattctggtgaactctaacccagccaccatcatgactgacccggaaatg
gctgatgccacttacattgaaccgattcattgggaagtggtgcgcaacatcatcgctaaa
gaacgccctgatgccattctgcctaccatgggcggccaaactgcactgaactgtgctctg
gaactggaagccaaaggcgttctgaaagaattcaatgtggaaatgattggcgcgacagcc
gatgccattgataaagcagaagaccgcgctcgcttcgatcaatccatgcgtaaaatcggc
ctggaatgtccacgtgcaggtatcgcacatagcatggaagacgcctataaggtgctggat
caagtgggcttcccctgcattatccgtccatcattcaccatgggtggttccggtggtggt
atcgcctataacgttgaagaatttgaagagatctgtacccgtggtctggatctgtctcca
accaatgaactgctgattgatgaaagccttatcggttggaaagagtacgaaatggaagtg
gtgcgtgatcgcaacgataactgcatcatcgtctgttctattgaaaactttgatgccatg
ggcgtgcacactggtgactccatcacggtggcgccggcacaaacgctgaccgataaagaa
tatcagctgatgcgtaatgcctcgatggcagtgctgcgtgaaatcggcgtggaaactggc
ggttccaacgtgcagtttggtatcaatcccaaagatggtcgcatggtcatcattgagatg
aatccgcgtgtgtcacgttcatccgctctggcctctaaagcgactggtttcccgattgcc
aaggttgcagcaaagctagcggtaggtttcactctggatgagttgatgaacgacatcact
ggtggtcgcacaccagcgtcgtttgaaccatctatcgattacgttgtgactaaagtaccg
cgcttcaactttgaaaagttcgccggtgccaatgaccgactgactacccagatgaaatct
gtcggtgaagtaatggcgattggccgcactttccaggagtctgtgcaaaaagcgctgcgc
ggtctggaaacgggcaaaaacggttttgatccgattgtggactggcaagatcccgatgcc
atgcagcgtatgcgtcatgagctgaaagagcctggcgcagagcgtatctggtatgtggct
gatgctttccgtgctggcatgagcatggatgaaatctacaagctgaccaacattgatcct
tggttcctggtgcagattgaagagctgatacaactggaagctaaagtggctgcaaccggt
ctggccggtatggatgccgatttcctctacaagctgaaacgcaaagggttctctgatgcc
cgtctggctgatgtgctggggatcagtgaatcagaaatgcgcaagctgcgttaccgtctg
gaaatcttcccggtttacaaacgtgtcgatacttgtgcggcagaatttgccactgacacg
gcttacatgtactccacttatgaggaagagtgcgaagccaatccgtccaatcgtgacaag
atcatggtattgggtggtggtccgaaccgtatcggtcagggtatcgaatttgactattgc
tgtgtgcacgcctcgctggcactgaaagctgatggctatgaaaccattatggtcaactgt
aacccggaaaccgtttcgactgactacgacacttctgatcgtctgtattttgagccggta
accctggaagacgtactggaaatcgcgcgtatcgagaagcccaaaggggtaattgtacag
tttggcggccagactccgctgaagctggctcgtgctctggaagcagctggtgtaccgatt
atcggcaccagcccagatgcgattgaccgtgccgaagaccgtgaacgtttccagcaggct
atccgtcgcctggagatgaaacagcctgaaaacgataccgtgaccaccgtggaaggcgct
gtacttgcggccgagaaaatcggttatccgctggtggtacgtccatcttacgtgctgggt
ggccgtgcgatggaaatcgtctatgaagaacaggatctgcgccgttacttcaaagaagcg
gttaaagtgtccaacgcttcaccagtgctgctggatcacttcctagatgacgctatcgaa
gtcgatatcgacgctgtttgtgatggcaagactgtggttgtcggtgccatcatggagcat
atcgaacaggccggagtgcattcaggtgactcaggttgttcattgccgccttacacactc
agccacgcgattcaggacgagatgcgtgaacaggtgcggaaactggcctttgaattaggt
gtggttggtttgatgaacgtgcagttcgccgtgcagaaaaacaccatcttcatgattgaa
gttaacccgcgtgctgctcgtaccgtgccgtttgtatccaaggctaccggtgtgccatta
gcgaagatcgcggctcgcgtgatggctggtcaatcactggaagagcagggcttcacgaaa
gaagtgatccctccctactactcagtgaaagaagtagttctgccatttaataaattccct
ggtgttgacccattgcttggcccagaaatgcgctctaccggtgaagtgatgggcgtgggt
gatacctttgcagaggcctatgccaaagcccaattaggtaccacttccaaggatatcccg
aaatccggtcgcgccttgttgtcagtacgtaatagcgataagaagcgggttgccgatttg
gctgccaagctgattgacctagggtatgagattgatgcgacccacggtactgcggtggtg
ctgggcgaagcgggtatcaaccctcggttggtgaacaaggtgcatgaaggtcgtcctcac
atcctcgatcggatgaagaacggcgagtacacctacattgtgaacaccactgaaggtcgt
caggccattgaagactccaagcaactgcgtcgtggagcgttgcgttacaaagtgaattac
accaccaccatgaacgctgcctttgcaacttgtatggcaaacactgcggacgatcgcaat
aaggtatcttctgtgcaagaactgcatgcacgcgtcactaagtaa
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