Shewanella yunxiaonensis: KDN34_04105
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Entry
KDN34_04105 CDS
T07775
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
syk
Shewanella yunxiaonensis
Brite
KEGG Orthology (KO) [BR:
syk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syk03400
]
KDN34_04105 (radA)
DNA repair and recombination proteins [BR:
syk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
KDN34_04105 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
DUF7125
Lon_C
AAA_22
GvpD_P-loop
AAA
SLFN-g3_helicase
Rad51
RecA_N
AAA_16
zf-LYAR
nSTAND_NTPase5
Viral_helicase1
AAA_14
ABC_tran
NTPase_1
AAA_24
nSTAND3
cobW
Zeta_toxin
KdpD
AAA_29
PAXNEB
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
QUN06645
UniProt:
A0ABX7YV39
LinkDB
All DBs
Position
867166..868530
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AA seq
454 aa
AA seq
DB search
MAKNKTAYVCTECGQDFPRWQGQCSACNEWNTITEVRLGAATAGRSGSFSGYAGAGSSEV
KTLDQIDLNEVPRIPSGFAELDRVLGGGIVAGSAILIGGHPGAGKSTLLLQTLCQLAETL
PALYVTGEESLQQVAMRAVRLGLPTGKLKMLSETNVDTICDVALKEQPKIIVIDSIQVMH
ISDVQSSPGSVAQVRESAAFLTRFAKQNNIAIIMVGHVTKDGSLAGPKVLEHCIDCSVMF
EGDSDSRYRTLRSHKNRFGAINELGVFAMTERGLREVANPSAIFLSRADEAASGSLVMVV
WEGTRPLLVELQVLVDHSALSNPRRIAVGMDSNRLAMLLAVMHRHGGLQMADQDVFVNVV
GGVKVTETSADLTLLLAMLSSFRGEVLPRDLVVFGEVGLSGEIRPVPNGQERLVEAAKHG
FRRAVVPIANVPKKAPPGMEVIGVRKLSEALAAL
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaacaaaacagcatatgtctgcacagagtgcggacaagattttcctcgttgg
caagggcagtgcagcgcctgtaacgaatggaacaccatcactgaagttaggctgggtgcc
gctaccgcgggccgtagcggcagttttagtggttacgctggtgcgggcagtagcgaggtg
aaaactctggatcagattgatctgaacgaggtgccacgcattcccagcggttttgctgaa
ctggatcgagtgttgggcggcggtattgtcgctggcagtgccattctgattggtgggcac
cctggtgccggcaaaagtaccttgttattgcagaccttatgtcaattggccgagacctta
ccggcgttatatgtgacaggtgaagagtcgttacagcaagttgccatgcgtgcggtacgt
ttaggactgcctaccggcaaactaaaaatgctgtcggaaaccaatgtcgataccatctgt
gatgtggcattaaaagaacaacccaaaattattgttatcgattcgattcaggtgatgcac
atcagtgatgtgcagtcatctccgggaagtgtggcgcaagtgcgcgaatcggcagcattt
ctaacccgttttgccaagcaaaataacattgccatcatcatggtgggacatgtcaccaaa
gatggcagtctcgccggacctaaagtgctggagcactgcatcgactgctcggtgatgttt
gaaggggacagtgatagccgctatcgtacattgcgttcccataaaaaccgctttggcgct
atcaatgaactcggtgtgtttgctatgaccgaacgtggcttacgtgaagtggccaatccc
tcggcaatttttttgtcgcgtgccgatgaagctgcgtctggctcgctggtgatggtggta
tgggaagggactcgaccgttgctggtggaattacaggtgttggtggaccattcagcgtta
tccaatccgcgtcgcattgcagtagggatggatagcaaccgtctagccatgttgctggcg
gtgatgcatcgtcatggtgggttgcagatggccgatcaggatgtttttgttaacgtggtg
ggcggcgttaaagtgactgaaaccagcgccgatctgacgctgttgctggccatgttgtcg
agttttcggggggaagtgttaccgcgtgatttggtggtgttcggcgaggttgggttgtct
ggtgaaattcgtccggtgcccaatggtcaggaacgcctggtggaggcagccaaacatggt
tttcgtcgtgcggtagtgcctatcgccaatgtcccgaaaaaagcgccgccgggaatggaa
gtcattggcgtgcgtaaactcagtgaagcattggcggcgctgtaa
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