Shewanella yunxiaonensis: KDN34_04670
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Entry
KDN34_04670 CDS
T07775
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
syk
Shewanella yunxiaonensis
Pathway
syk00260
Glycine, serine and threonine metabolism
syk00460
Cyanoamino acid metabolism
syk00630
Glyoxylate and dicarboxylate metabolism
syk00670
One carbon pool by folate
syk00680
Methane metabolism
syk01100
Metabolic pathways
syk01110
Biosynthesis of secondary metabolites
syk01120
Microbial metabolism in diverse environments
syk01200
Carbon metabolism
syk01230
Biosynthesis of amino acids
syk01240
Biosynthesis of cofactors
syk04981
Folate transport and metabolism
Module
syk_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
syk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
KDN34_04670
09102 Energy metabolism
00680 Methane metabolism
KDN34_04670
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
KDN34_04670
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
KDN34_04670
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
KDN34_04670
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
KDN34_04670
Enzymes [BR:
syk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
KDN34_04670
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
OKR_DC_1
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
QUN06747
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All DBs
Position
998379..999632
Genome browser
AA seq
417 aa
AA seq
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MLKKSMNIADYDAELFQAIEDENRRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYP
AKRYYGGCEYVDVVENLAIDRAKQLFGATYANVQPHSGSQANYAVYMALLKPGDTVLGMN
LAHGGHLTHGSPVNFSGKLFNIIPYGVDDQGKIDYAELETLALQHKPKMIIGGFSAYSGI
VDWAKLREIADKVGAFLFVDMAHVAGLVAAGVYPSPIPHAHVVTTTTHKTLAGPRGGLIL
SAADDEDLYKKLNSAVFPGSQGGPLMHVIAGKAVAFKEALEPAFKAYQQQVVTNAKAMVE
VFLERGYKIVSGGTDNHLMLVDLIGRELTGKEADAALGRANITVNKNSVPNDPRSPFVTS
GIRIGTPAITRRGFKEAEAKLLTGWICDVLDNASDEAVIDTVKGKVLELCARFPVYG
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagaagagtatgaacatcgccgactatgatgcggagctgtttcaggctattgaa
gatgagaaccgtcgtcaggaagaacacattgagctgatcgcttccgaaaactacaccagc
ccacgggtcatgcaggcccaaggctcacagttaaccaacaagtacgccgaaggctatcct
gccaagcgttactatggcggttgtgagtatgtggatgtggtggaaaatcttgccattgac
cgtgctaagcagctgtttggcgcgacttatgccaacgtgcaaccccattcaggttctcag
gcaaactacgctgtgtacatggcgttgttgaaacccggtgatactgtgctggggatgaac
ctggctcatggtggtcacctgactcacggctcaccggttaacttctccggtaaactgttt
aacatcattccttacggtgtcgatgatcagggtaagattgattacgctgaattggaaaca
ttggcgttgcaacataagccgaagatgatcatcggcggtttctccgcttattccggtatc
gttgattgggccaaactgcgtgaaattgctgataaagtcggtgctttcctgtttgtggat
atggcccatgttgctggtctggtggctgcaggtgtatatccaagcccaatcccacacgca
catgtggtgacgactactacgcacaaaaccctggcgggtcctcgtggtggattgatcctc
tccgctgccgatgacgaagatctgtataagaagctgaactcagcggtattcccgggcagt
cagggcggtccactgatgcacgtgattgccggtaaggctgtggcgttcaaagaagcgtta
gagccagcattcaaagcttatcagcagcaggttgtgaccaacgccaaggcgatggtagaa
gtattcctggaacgtggctataagatcgtttctggcggcactgacaaccatctgatgctg
gtagatcttatcggccgtgaactgactggtaaggaagccgacgccgcccttggtcgtgcc
aacattaccgttaacaaaaactctgtgcctaatgacccacgttcacctttcgtgacttcc
gggatccgtattggtactccggcgatcactcgtcgtggatttaaagaagccgaagctaaa
ctgctcaccggctggatctgtgatgtgctggacaacgccagtgatgaagccgttattgac
acagtgaaaggcaaagtgctggaactgtgcgctcgcttccctgtttacggttaa
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