Shewanella yunxiaonensis: KDN34_04690
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Entry
KDN34_04690 CDS
T07775
Symbol
ribB
Name
(GenBank) 3,4-dihydroxy-2-butanone-4-phosphate synthase
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
syk
Shewanella yunxiaonensis
Pathway
syk00740
Riboflavin metabolism
syk00790
Folate biosynthesis
syk01100
Metabolic pathways
syk01110
Biosynthesis of secondary metabolites
syk01240
Biosynthesis of cofactors
Module
syk_M00125
Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:
syk00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
KDN34_04690 (ribB)
00790 Folate biosynthesis
KDN34_04690 (ribB)
Enzymes [BR:
syk01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
KDN34_04690 (ribB)
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
KDN34_04690 (ribB)
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Paralog
GFIT
Motif
Pfam:
DHBP_synthase
GTP_cyclohydro2
Motif
Other DBs
NCBI-ProteinID:
QUN06751
UniProt:
A0ABX7YWN4
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All DBs
Position
1002114..1003232
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AA seq
372 aa
AA seq
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MALHSIEEIVEDFRQGKMVILMDDEDRENEGDIIIAAEKITPEAINFMARYGRGLICLTL
TKARCQQLHLPLMVKDNSAPFSTNFTVSIEAAEGVTTGISAHDRAVTVQKAVAKHAEPAD
IVQPGHIFPLMAQDGGVLVRAGHTEAGCDLARLAGLEPAAVIVEVLNEDGTMARRPQLEA
FAETHGIKVGTIADLIEYRNNTETTVILEGKCKLPTRFGEFELHAFRDTIDNQLHYAMVR
GEITDNLLVRVHLQNTFHDLLYSERDEVRSWPLDKAMALIGKEGGVMLLLGNQEPMSDVI
AKVKAFEAEDKGEQALPHRSQKTSQRVGVGSQILATLGVKRMRLLSSVKRYHSLGGFGLE
VTEYIPDDSDSN
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggcgttacacagtattgaagagatcgtcgaggatttccgtcagggtaaaatggtcatt
ctgatggatgacgaagaccgggaaaatgaaggtgatatcattattgccgctgaaaaaatc
accccggaagcgatcaactttatggctcgttacggccgtgggctgatctgtctgaccttg
accaaagcacgttgtcagcagctgcacttgccgttaatggtaaaagataacagtgcgccg
ttttcgactaattttaccgtatccattgaagcggccgaaggtgttactacgggcatcagt
gcccacgaccgcgcggtaaccgttcagaaagccgttgccaagcatgctgaaccagcagat
atcgtgcaacccggacatatcttcccgttgatggcacaagatggcggggtgctggtacgt
gccggccataccgaagctggctgtgatttagcgcgtttggctggtttggagcctgcggcc
gtcattgttgaagtgcttaacgaagatggcactatggcacgtcgcccacagttggaagca
tttgccgagacgcatggtatcaaagtgggcaccattgccgacttgattgaatatcgcaat
aacaccgaaaccaccgtgattttggaaggtaaatgtaaactgccaacccgtttcggtgag
tttgaactgcacgcgtttcgcgacaccatcgataaccagttgcactatgcgatggtacgc
ggggaaattactgataacctgctggtgcgagtgcatctgcaaaacactttccacgatctg
ctgtattccgaacgcgatgaagtccgcagttggccgctcgataaagccatggcactcatt
ggtaaggaaggcggcgtgatgttgctgttaggtaatcaggaaccgatgagtgatgtgatc
gccaaagtcaaagcattcgaagctgaagataaaggcgaacaagcgttacctcaccgttct
cagaaaacttcgcagcgggttggtgttggttcacagatcctggcaaccctcggcgtcaag
cgcatgcggttattgagctcagttaagcgttatcattcgctgggggggtttggtctggaa
gtcaccgagtatattccggatgactctgacagtaattaa
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