Shewanella yunxiaonensis: KDN34_04940
Help
Entry
KDN34_04940 CDS
T07775
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
syk
Shewanella yunxiaonensis
Pathway
syk00280
Valine, leucine and isoleucine degradation
syk00650
Butanoate metabolism
syk00907
Pinene, camphor and geraniol degradation
syk01100
Metabolic pathways
syk01120
Microbial metabolism in diverse environments
syk04146
Peroxisome
Module
syk_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
syk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
KDN34_04940
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
KDN34_04940
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
KDN34_04940
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
KDN34_04940
Enzymes [BR:
syk01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
KDN34_04940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-ProteinID:
QUN06800
LinkDB
All DBs
Position
complement(1058254..1059150)
Genome browser
AA seq
298 aa
AA seq
DB search
MYPSSISIYEVGPRDGLQNERPVAMRDKVQLINHLANAGLKRIEAGSFVSAKWVPQMADS
AAVLGQITRHAGVRYSALTPNLAGFEAALAAGVDEVAVFTAASESFCQRNINCSIQESIT
RFAPLMKQAKLVGIPVRGYVSCVLGCPYEGYIAPTQVAAVAQELLQLGVYEISLGDTIGV
GTPLKARNMLDTVASKVPVAQLALHFHDTYGQALANILACLDAGITTLDTAVAGLGGCPY
ARGASGNLATEDLVYMLHGLGIQTGVDLPNLARAGAQISQILKRNNGSKVGQVLATEQ
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgtatccatcatccatcagtatctatgaagtcggtccacgcgacggtctgcagaatgag
cgcccagtggcaatgcgtgacaaagtgcaattgattaatcacttagccaacgcggggctc
aagcgaattgaggcaggcagctttgtgtctgccaaatgggtgccacaaatggccgactcg
gcagcagtactgggacagataacccgccatgccggtgtgagatactcagcactgacacca
aaccttgccggatttgaggccgcactagccgccggtgtcgatgaagtggcagtgtttacc
gctgcctctgaaagtttctgccagcgcaatatcaactgcagtatccaggaatcaatcacg
cgttttgccccattaatgaaacaggccaagcttgtcggcataccagtgcgaggttacgtg
tcctgcgtactgggctgcccttacgaaggctacattgcaccaacacaagtcgccgcagtg
gcacaggaattactgcaacttggcgtttacgaaatctccctcggcgacaccattggtgtc
ggcaccccactgaaagccagaaacatgctcgataccgttgccagcaaggtgccagtagcg
caattagcgctgcattttcatgacacttatggacaggcgctggccaatattctcgcgtgt
cttgatgccgggattacgacgcttgataccgcagtggcgggtcttgggggttgcccctac
gccagaggtgcgtctggcaatctggcgacagaggatctggtgtatatgctgcacggttta
ggcatacaaaccggcgtggacttaccgaatctggctcgcgcgggggcacagatcagtcag
atactcaagcgtaataatggtagtaaggtcggtcaggtgttagccactgaacagtga
DBGET
integrated database retrieval system